Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2622 |
Symbol | |
ID | 6461721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2712801 |
End bp | 2714960 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642728779 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_002019400 |
Protein GI | 194337606 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCCA CTGTTTTTCA GGAAATGATC AAGCGTGACG GACGTAAAGT GCCGTTCGAT GCTGAAAAGA TTGTATATGC TGTTTTTCGT GCATTGCGGG CCGTTGGAAA GGCTGATCGT ACGAAAGCTG CGGGCATTGC CAGGGATGCC ATCAGGGAGC TTGAGAGCGC GATGAATGGC AATGTTCCTT CGGTTGAAGA GATGCAGGAT ATGGTGGAAA AAACCCTTTT TCTGCATCGG GAGTTCGATG CGGCTAAAGC CTATATCATC TACCGGCACC AGCATCAGTA TATGCGAGAT GCGAAAGAGA TGTTCAGCAA TATTGACGTT GTCGACAGCT ATCTCGATAT CGAAGACTGG AGGGTGAGGG AGAGCGCCAA CTCCTCCTGG TCGTTGCAGG GGCTCAATCA GCATATCTCG ACTATTGTCA GTGCCCAGTA CTGGCTGAAT CGCATTTACC CTCCAGAGAT CAGCGATGCG CATACCTCAG GGCTCATGCA TATCCACGAT CTGGGGTTCC TGAGTGTCTA TTGCGTCGGC TGGGATCTTG AGGATCTTCT GATCAGCGGT TTTATGGGCG TTGAGGGGCA CGCGGCAAGC AAGCCGGCAA GGCACCTGCG CTCGGCGCTC GGCCAGATCG TCAACTTTTT CTATACCATG CAGGGGGAGG CCGCCGGCGC GCAGGCGTTT TCGAACTTCG ATACCCTGCT TGCCCCCTTC ATCAGATACG ACCGACTCGA TTATGACGGG GTGAGGCAGT GTCTGCAGGA GTTCTTTTTC AATATGAACG TGCCGACCAG GGTTGGGTTT CAGACTCCCT TTACCAATCT GACCCTCGAT CTCAGGGTGC CTGCAATGCT GAAAGACAGG GCTGTCATTA TAGGCGGCAA GCTGATGGAT TGCACATACG ACGATTTTCA GCACGAGATG GATCTGTTCA ATCGCGCCTA TGCCGATGTG ATGCTCGAAG GCGATGCGAA CGGCGCTGTT TTTTCCTTTC CCATCCCGAC CTATAACATC ACGAAGGATT TCGACTGGGA GAACCCGCTC TATGACGGGA TATGGAAAAT GACGGCGCGT TACGGAATTC CCTACTTTTC TAACTTCGTG AACTCGTCGA TGAACCCTGA TGATGTGCGC AGCATGTGCT GCCGACTCCG GCTCGACAAG CGCGAACTGC AGAAAAAGGG CGGGGGTCTG TTCGGGTCGA ACCCTTTGAC CGGTTCTGTC GGTGTCGTGA CCATGAACCT GCCGAGAATC GGTTACGAGT CGAAAGGGGA GGCTGAGTTG TTCGAACGGC TTTCGCATAC AATGGAACTG GCCAAAAGCA GTCTTGAAAT CAAACGGAAA GTTGTCGAGC GTCTTACCGA GGAGGGACTC TATCCCTACT CCCGTTTTTA TCTGCGCAAT CTCCGCCAGA AAAACGGCCG CTACTGGGAC AATCACTTTT CGACCATCGG TATCACCGGC ATGAACGAGT GCTGCCTGAA CTTTCTCGGT TGCACGATAG CCGAGCCAGA GGGTCGCCGA TTCGCCCTTC AGGTGATGGA TTTCATGCGG GAAAAACTGG CGGTTTTCCA GGAGGAGAGC GGCACTATCT ACAATCTCGA AGCCACTCCA GCCGAAAGTA CAGCTTATCG TCTTGCACGC ATCGATAAAT CCCGTTACCC GGATATCGTT ACGGCCAACG AATCTGCTGT GAAGAACGGC GCGGAGCCTT ATTATACCAA TTCGACGCAA CTGCCGGTCG GTTATACTGA CGATCTTTTC GAAGCGCTCA GGCTTCAGGA TGAGTTGCAG TCGCGTTATA CGGGAGGAAC GGTATTCCAT GCCTTTATCG GCGAACGCGA GCTTCCCCCC GAGGGTGTCA AGCGTTTTGT GAAGAGGGTG ACCGATAATT TTACCTTGCC CTACATAACG CTCTCCCCGA CATTCAGTAT CTGTCCGACA CACGGATATC TGTTCGGCGA GCATGAATGC TGTCCCAAAT GTGCAGTATC GGGCATCGAG CGACGTTGCA CCGTCTATAC GCGAATTGTC GGTTATCTCA GGCCTGTCCG CCAGTGGAAT CCGGGAAAAC AGAGCGAGTT TTTCGATAGA AAGCTGTTTG CTGTGGGGAT GGTCGAGGAA GAGTCGCTGT GTGCAGAGGA GGGTCATTGA
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Protein sequence | MDATVFQEMI KRDGRKVPFD AEKIVYAVFR ALRAVGKADR TKAAGIARDA IRELESAMNG NVPSVEEMQD MVEKTLFLHR EFDAAKAYII YRHQHQYMRD AKEMFSNIDV VDSYLDIEDW RVRESANSSW SLQGLNQHIS TIVSAQYWLN RIYPPEISDA HTSGLMHIHD LGFLSVYCVG WDLEDLLISG FMGVEGHAAS KPARHLRSAL GQIVNFFYTM QGEAAGAQAF SNFDTLLAPF IRYDRLDYDG VRQCLQEFFF NMNVPTRVGF QTPFTNLTLD LRVPAMLKDR AVIIGGKLMD CTYDDFQHEM DLFNRAYADV MLEGDANGAV FSFPIPTYNI TKDFDWENPL YDGIWKMTAR YGIPYFSNFV NSSMNPDDVR SMCCRLRLDK RELQKKGGGL FGSNPLTGSV GVVTMNLPRI GYESKGEAEL FERLSHTMEL AKSSLEIKRK VVERLTEEGL YPYSRFYLRN LRQKNGRYWD NHFSTIGITG MNECCLNFLG CTIAEPEGRR FALQVMDFMR EKLAVFQEES GTIYNLEATP AESTAYRLAR IDKSRYPDIV TANESAVKNG AEPYYTNSTQ LPVGYTDDLF EALRLQDELQ SRYTGGTVFH AFIGERELPP EGVKRFVKRV TDNFTLPYIT LSPTFSICPT HGYLFGEHEC CPKCAVSGIE RRCTVYTRIV GYLRPVRQWN PGKQSEFFDR KLFAVGMVEE ESLCAEEGH
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