| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2606 |
|---|
| Symbol | |
|---|
| ID | 6461523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2693331 |
|---|
| End bp | 2694854 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728762 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | YP_002019384 |
|---|
| Protein GI | 194337590 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGA AAGCGCCGCC TGCCATAGAT TTCAGCAAGG ATATCGATTT CAGCAAGGAG
AGCCGTTTGC CTCCCTACTC AACGGAAATT GAGCAGGAGG TTCTTGCCTG TATTCTGCTT
GAAGATGAGC CGATTGAACA GGTGATCCAG ATTTTCGGCG ATAACGGTGA GGAGGTCTTT
TATGAGCGGC GCCACCAGAT TATTTTCAAG GCGATGATGC AGCTCTACCA TAAACGGCAG
GCTCTCGACA TTATTACAGT CAGCGAGGAG TTGCTGAAAA TGAACGAGCT TGAGCCCGTC
GGCGGACGCC ACTACCTGGC TGAACTTTCG GGCAAGGTAA TCAGCGCTGC AAATATTGAA
TATTATGCGC GTCTGGCAAA GGAGAAGTAC CTGTACCGGC GCATGATCTC CATTTCGGCT
AAAATTTCCG GTGTAGCCTA CAGCTCATCG ATGGATATTT TCGATCTTGT CGAACATGCC
TCACAGCAGT TTTTCAATAT CTCCCAGGCT GGTATCAAAA AGAAGGCATC GCTGATCAAG
GAACTGATCA AAAATGGTAT CCATATGCTT GAGAGCCTCA GGGCATCTCA ATCTTCCGTC
ACTGGCGTTG GATCGGGATT TTCCGAGCTT GATCAGCTTA CAGCCGGATT TCAGCCCTCC
GACATGATTA TCATTGCAGC AAGACCTTCG GCGGGAAAAA CGGCGCTGGC GCTTGCTGTC
GCCCGTAATG CTGCCGTGGA TTTCGACACC CCGGTGCTTT TTTTCAGTCT TGAAATGGCT
GAGGTACAGT TGGCCATCAG GCTTATGTGT GCTGAAGCCT ATGTTGAGTC GCAGCTTGTC
CGAACGGGCC GGATAACGCC TGAGATGATG GGCCGAATCA TCAACAGCAT GGACAAGCTC
AATGAAGCGA AGCTTTTTAT TGACGATACC GCCGGTATCT CCATTATGGA ACTTGCCGCA
AAAACCCGCA GGATGAAGCA GGAACACAAT ATTGGCATGG TTGTTGTTGA TTACCTGCAG
TTGGTCACAC CGGTCAGGGA TGGCAGAACA AACCGCGAAC AGGAGATTGC ACAGATATCC
CGCTCGCTGA AGGCGCTGGC AAAGGAGCTG AATATTCCCG TCATCGCCCT GGCACAGCTC
AACCGTTCTG TCGAACAGCG CTCAGGAGAC CGCAGGCCTC AGCTCAGTGA CCTCAGGGAG
TCGGGCTCTA TTGAACAGGA TGCTGATGTG GTCATGTTCC TTTCCAGACC GGAAATGTAT
GGCAAACAGA CTTTCGAGGA TGGCTCATCG ACAAAAGATG TGGTCGAAAT AGTCATCGGC
AAGCAGCGAA ATGGCCCGAT CGGAGATATA CGATTGTTGT TCCTGAAAAA TTATGGCCGT
TTTCAATCCA CAGCCAACAG CTATGTTACC GGTGGCGAAG GATCGACAGC TTCCGGAAAT
CAGGATCATC ATACAGCCGC ATTGCCGGAA GCAGGAAAAT CAGTTATCAC CCAGTTTATC
TCTCAAGACG ACGCACCTTT TTAA
|
|---|
| Protein sequence | MIKKAPPAID FSKDIDFSKE SRLPPYSTEI EQEVLACILL EDEPIEQVIQ IFGDNGEEVF
YERRHQIIFK AMMQLYHKRQ ALDIITVSEE LLKMNELEPV GGRHYLAELS GKVISAANIE
YYARLAKEKY LYRRMISISA KISGVAYSSS MDIFDLVEHA SQQFFNISQA GIKKKASLIK
ELIKNGIHML ESLRASQSSV TGVGSGFSEL DQLTAGFQPS DMIIIAARPS AGKTALALAV
ARNAAVDFDT PVLFFSLEMA EVQLAIRLMC AEAYVESQLV RTGRITPEMM GRIINSMDKL
NEAKLFIDDT AGISIMELAA KTRRMKQEHN IGMVVVDYLQ LVTPVRDGRT NREQEIAQIS
RSLKALAKEL NIPVIALAQL NRSVEQRSGD RRPQLSDLRE SGSIEQDADV VMFLSRPEMY
GKQTFEDGSS TKDVVEIVIG KQRNGPIGDI RLLFLKNYGR FQSTANSYVT GGEGSTASGN
QDHHTAALPE AGKSVITQFI SQDDAPF
|
|---|
| |