Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2600 |
Symbol | |
ID | 6461411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2684290 |
End bp | 2685225 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642728756 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002019378 |
Protein GI | 194337584 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCACA TGGATAACCC GTCAATCAGT GTTGTGCTGC CGTTGTACAA CCATGCTCAC TACATTGCTT CAACGTTGCA AAGTGTTTTG GAGCAAACTT CTCCTGTTGA TGAAATCATT CTGATTGATG ACGGTTCAAC CGATAACGGC TTCAGCATAG CATATAAAAT GCTGAGAGAT GAGCCAAGGG CAACACTGTT GCAGCAAGAA AACTGCGGCG CTGAGAAGAC GTTGAACAGG GCAATAGGGC TGTCGCAAAG TGAATTTATT GCGGTGCTTA ATACCGATGA TCTTTTTTTG CCAACCAAAA TAGAGCGCTG CCGGAACATT ATCTGCAATC ATCCGGAAGT TGATTTTGTC TGCGGCGGAA TCGGCATCAT TGACGAAAAG GGTGGGCGGC TCTCTGACGG TGAAACCGTT GAATGGCTGC AAAGGGCATC AGCATTCCAG AAAAAGTGCA GGACTCTTGA TCTGGCTTTT TTGAATGAAA ATTCGGTGAC ATCGACGTCG AATATGTTTT TTTCGCGTGA ACTGTGGAGA AAGTGCCAGG GATTTCAGCC GTTGCGCTAT TGCCATGATC TGGATTTTCT TTTGACTGCA CTCTGCCATC ACTGCGTCAT GATCGACATG GAGCAGACGC ATATCCTTTA CAGGGTACAC CGAAAGAACA CCATCAAGGA GGATCTCCTG AAGGTACGCC TTGAAGTGGC TGCTGTGATG GCCAATACCA TGAAAACAAA CAGTGCCCGA TTACTTGATG CTGAGCGCCT CTCTTCCGAC CTCCCGCTGA TTTCAGAAAT ACTGAGGTCA AAAAACAATG CTGCACTGCT CGCGACGCTC CAACTGCTGC GCAACAACTG TTCTGACCGT CACGATTTTT ATACGCTGCT CAAGAATCCA AAAACCTCGG AGTGTCTGAT ACAACAGTTT ATGTAG
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Protein sequence | MTHMDNPSIS VVLPLYNHAH YIASTLQSVL EQTSPVDEII LIDDGSTDNG FSIAYKMLRD EPRATLLQQE NCGAEKTLNR AIGLSQSEFI AVLNTDDLFL PTKIERCRNI ICNHPEVDFV CGGIGIIDEK GGRLSDGETV EWLQRASAFQ KKCRTLDLAF LNENSVTSTS NMFFSRELWR KCQGFQPLRY CHDLDFLLTA LCHHCVMIDM EQTHILYRVH RKNTIKEDLL KVRLEVAAVM ANTMKTNSAR LLDAERLSSD LPLISEILRS KNNAALLATL QLLRNNCSDR HDFYTLLKNP KTSECLIQQF M
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