Gene Ppha_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2600 
Symbol 
ID6461411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2684290 
End bp2685225 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content47% 
IMG OID642728756 
Productglycosyl transferase family 2 
Protein accessionYP_002019378 
Protein GI194337584 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCACA TGGATAACCC GTCAATCAGT GTTGTGCTGC CGTTGTACAA CCATGCTCAC 
TACATTGCTT CAACGTTGCA AAGTGTTTTG GAGCAAACTT CTCCTGTTGA TGAAATCATT
CTGATTGATG ACGGTTCAAC CGATAACGGC TTCAGCATAG CATATAAAAT GCTGAGAGAT
GAGCCAAGGG CAACACTGTT GCAGCAAGAA AACTGCGGCG CTGAGAAGAC GTTGAACAGG
GCAATAGGGC TGTCGCAAAG TGAATTTATT GCGGTGCTTA ATACCGATGA TCTTTTTTTG
CCAACCAAAA TAGAGCGCTG CCGGAACATT ATCTGCAATC ATCCGGAAGT TGATTTTGTC
TGCGGCGGAA TCGGCATCAT TGACGAAAAG GGTGGGCGGC TCTCTGACGG TGAAACCGTT
GAATGGCTGC AAAGGGCATC AGCATTCCAG AAAAAGTGCA GGACTCTTGA TCTGGCTTTT
TTGAATGAAA ATTCGGTGAC ATCGACGTCG AATATGTTTT TTTCGCGTGA ACTGTGGAGA
AAGTGCCAGG GATTTCAGCC GTTGCGCTAT TGCCATGATC TGGATTTTCT TTTGACTGCA
CTCTGCCATC ACTGCGTCAT GATCGACATG GAGCAGACGC ATATCCTTTA CAGGGTACAC
CGAAAGAACA CCATCAAGGA GGATCTCCTG AAGGTACGCC TTGAAGTGGC TGCTGTGATG
GCCAATACCA TGAAAACAAA CAGTGCCCGA TTACTTGATG CTGAGCGCCT CTCTTCCGAC
CTCCCGCTGA TTTCAGAAAT ACTGAGGTCA AAAAACAATG CTGCACTGCT CGCGACGCTC
CAACTGCTGC GCAACAACTG TTCTGACCGT CACGATTTTT ATACGCTGCT CAAGAATCCA
AAAACCTCGG AGTGTCTGAT ACAACAGTTT ATGTAG
 
Protein sequence
MTHMDNPSIS VVLPLYNHAH YIASTLQSVL EQTSPVDEII LIDDGSTDNG FSIAYKMLRD 
EPRATLLQQE NCGAEKTLNR AIGLSQSEFI AVLNTDDLFL PTKIERCRNI ICNHPEVDFV
CGGIGIIDEK GGRLSDGETV EWLQRASAFQ KKCRTLDLAF LNENSVTSTS NMFFSRELWR
KCQGFQPLRY CHDLDFLLTA LCHHCVMIDM EQTHILYRVH RKNTIKEDLL KVRLEVAAVM
ANTMKTNSAR LLDAERLSSD LPLISEILRS KNNAALLATL QLLRNNCSDR HDFYTLLKNP
KTSECLIQQF M