Gene Ppha_2596 details

Gene Information

• Locus tag: Ppha_2596
• ID: 6461435
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 2672609
• End bp: 2678524
• Gene Length: 5916 bp
• Protein Length: 1971 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642728752
• Product: Hemolysin-type calcium-binding region
• Protein accession: YP_002019374
• Protein GI: 194337580

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTAA TTCCTCCTTC AATTACGACA GGTTCATTGG AAAGCTGGGA GTATTTTGCC 
TCCTACGGTG ACCTGAGGGG CTGGGCGCTG CTTGATGGCG TGCTGAATGC GGCTGATTCT 
ACGAATGCTG CATGGCATTA TAACATGCAT GCCAGTGCAG AAAATCGTTC AATTGTCTTT 
GATGCATGGG AATATCTTGC ATCGAACATT GATCTTATGA ACTGGCTTGG TGCTGACGGC 
ATTACCGATG CTGACGCAAT CAAGGCAGCA CAGCACTATA TTACGAACGG TGCGGCTGAG 
GGACGTTCAA TGGGCACCTT TGACTCTGCA GCCTATCTTG CAGCAAATGC TGATTTGAGA 
GATTGGCTTG GCGCTACCAA TTATGATGCA GCGGCCAAAC ACTACATTCA GTTCGGTCGT 
GCGGAAATTG CAGCCGGCAC TCCTGGTCGT CTCCTGAGAC TCGATAACAG CTTCACGCTT 
ACGACTGATG ATGATACCGC AACAGCCAAT GTGTTCAACT CGGCGCCAAA GCTGGTTCCC 
GGCACAGGCT ACCTGACGAC ACTTTCAGAC AACGACGTCT TGACAGGTAT CGGCACCAAC 
CCTACGCTGA ATGTTGAAAT TGGCACACAG ACTGATTTCA CTTCAGAGGA GGCCATGATT 
CAGCCAACAC TCAATGGCAT TACTACAGTT AATGTTGCCT GGACGAGTGA TGATGTTACA 
GAATTGATTC TCGCTGATGC AGATTTGCTG CAGACATTGA ATGTTACACG CATCACGGCA 
ACCAATGCCT CTGTCAAGCA TACTGAATTG AGCGCTACGG TATCAACAAT TACCCTGAAC 
GATGCAACCC GTTCCGGAAC CGTTGACTTC ACTACAAGAG AAGAGGTTCT CACAGGAACG 
TCAGACGTTC TGGCCTTCGG TGTGAACAAT GTTCGTGTTC ACAAAGTGAC GCTGAACGAG 
GGTGGCGATA ATGATGCTGA CCTTGGTTTC TACTACGAAA CCATCAACAT GGCATCGAAC 
GCCACGAACG ACGTTGATGC GCTGACGATC GGCGCTAACA CACGCGAAGA TCTGCAAAAT 
GATTTACCCT CTGGCACAAC AACCCAGACA CTGAGCATTA CAGCCGGCGC TTCAGTCGGT 
GCTGCGGGTT CCCTTGAAAT CAACCAACTG ACGGCAAATG GTCTGGAGAC CATCAACATC 
GTCGCGAACC ACCGTGTTGA TATCGTCAAA GACAAACTCC TTCCCTTATC TCCAGGCAAC 
GATGGTATCT CGACAAACGA TCTGGAAACT GTGAACATTT CCGGCGCAGC CAACGTCATG 
ATTGATGGCC TCGATACCAC CAAGCAGGAT GCCGGAGTAG TGCTGACCGT GAACGCAGGT 
ACCATGACCG GCAACCTGAA ACTTGGTGTT CAAACGCCTT CCGATGGTAA CCCTTCGACA 
CTCTACGCAT TCCGTGCAGA CGAAGATCTG AAAGTCACGT CAGGATCCGG CAATGACCAG 
ATTCACACTT ACGGTGTGCT TGCAGGCGAT ATCTCCACCG GCTCTGGTAA CGACGTTGTT 
GCTATCCGTG GTTGTGAAAT GGGTTCCGCC GACGTCGAAG GTGTATCGCA GATTGATACC 
GGTACCGGTA ACGATAGCGT AACAGCCGCA TCATTGCTGG TGACAGCTCA TGACAAGGAC 
GAATCAAACA ACACCGGTTT TGACGATGTA ACAGCAGCTT CGATTGTGAC CGGCGATGGC 
AACGACTCTG TTACAGTAAC AAGCTTGACA AGCGGTTCCG ACTGGGACAA CATTACCCTG 
ACTGACGGTA ACAAAAATGA CCAGCAGAAG AAGATCGGCG CAATTGTAAA CACGGGTACA 
GGCACAGATG CAGTCATCTT TACCATGGTT GCTGAAGGCG CTTTGGTTGA TACCGGAGCT 
GATAACGATA CGGTAAGCGC TGGTTTGACA GATTATGCTA CTATTCTTGC CGGAGATACC 
GATGCAGATG TACAGACCCT TGTCGATGCT ACACATGGCG ACTCCGGTAA CGCATACACC 
GATGAAGTCT CCTCGCTTGG TGTTATTGAT CGTCTCGGCG CTATCGTTGA TTTGGGCGCT 
GGTGCAAACG ACGTGATCAA CTTCACAGAG TCTGATGCCG GTATTGCCGA TACCATGTCT 
TCCGCTCCGA CAGAGACAAC CCGTTCTGCA TTTACTATTG TAGGGCGTGA TGCAGAGCTT 
CGTGGTGCTG AAACCATGAA CGTGACGGCA CTTGATGATG TCAATGTTGA TGTTCTTACC 
ACGATGGCGG ATCAGGATAC AACGATGGCT GGTTCACAGA CAGACCTCAA CGTCAACATT 
ATCGGTACCC AAATCCTGAA TTTGACGGTA GCGAACCAGA TCGAGGATAC CGATACGGCT 
GATACCATTG TACAGCACAC GAACGGTTTC CATGCTGTAA ATGACAACAA CGCTACAGAT 
GGCGCAATCA CGACAGACGT TATGCGTTTT GATGCAGCAT TGGCAACCAT TAACCTTGCC 
TCACAGGAAA AATGGCTGGA AACGGGTCCG GCAACCGAAA GCTACGAGGC TGGTACCAAG 
ACCACATTCA CGTTGAACAA CATGCGTGAA GGCGTAGCTT TGACACTTTC AGCATTCGAA 
GCAACCGGTG TCACCGGTGG CGCTCTTGTT GATGACAGCG TTCTGGCAAT CAGCACAACG 
GATCAGGACA CGCTTACGGG TGGTGTACAG GTAACCGGCG CGATTACCAC GAATGCGCCA 
GCTACAGACG TTTACCTGAA CATTAACTAT GATGGTGCGC GTGACCTGAA CGATGCCGCA 
GCATTGACCA TCAATGCCGC AGAAGCATTC GACCTCTCTT TGAATGTTGA TTCGCATGTT 
GCTACCGATA CCGTTGGTAA CGCAGCTTCA ACAACCGACG ATGATACAAC GCTGGTTGAG 
AACTTCACCC TCACCTTCTC TGATGCCAAT GCGCACTCAG TAGACATGAA TGGTTTTGGT 
GATTTTAACT TCCGCGCAAC CCGTGCTCCA CTTGTTGCAG GTGATGTCTC TTCCACCGCT 
GTTACCTCCT TCACCCTGAA CTCTGGCGCT GCTGCCGGCG CAGGCATTGA GGTCAACAAC 
GTCAATGCTG ACACTATCCG CGTCAACAAT GCTGCAGGTA CAGCAGTAAC TGCTGCAAAC 
GTAACCCTGC GCGTGGATGT CGACAACAAC TACAACATTG CAACAGGTTC CGGTACAGAC 
ATCATCGACA TGCGTCTGGA TGATGTTCGT TCGGATGACA CGGTATCTGC ATTGAACCGT 
GCCGACACTG TCAGCGCTGG CGACGGTCGC GATACGCTGA TTGTTGATGG CAACGATGAC 
CTCGGCACAA ACGACAACGC AGGTGTCAGC CCTTCAATGA TTGTCAACGA TGATGTCTTT 
ATGAATCTTG ACAGCATCGA AACGATTCTG GTTGACACGG CAACAGCTAA CAACGGTGGA 
AACGGCGATT TGACGATTAC CATCGACGAG CAGGCAGGTA CCGGCGCAGG CAACACGAAT 
GTGGATACCA TCCGCATGAT CGGTAACCAG GATAACCGGC TTGATCTTCT GATCGGTAAC 
AACTTCACGG TTGGTTCAAC GGTCAACACC CAGAACATTG CTGGTGGTGC ATTGCTGATT 
GATCTGAATG CACACCTTGC CCAGACCACA TTAAACATCG AGAGCAAAGA CGATGATACC 
GATATTCAGT TTGTAAACAT GGATATCCAG GTTGCAGCCA AAGGTGGTAC CATTATGAAC 
ATGGTCAACT CCGGCTCACA GACGGCTACG GTTGAAGTTC GTGTTTATAC CGCTGATGAA 
AACGATGCAC ATGTCATCAG CTCCAGTAAC ACTGGTACCG GTGATGGAAA TGTTGATATC 
AACACCGGCT ATGTTGGCAG CGCAGCTACC CTGGCAGCAG GCGCTTTCGA CAAACTCGTT 
TTGGTTGAAG GTGCAACGGC AAACGACGGT GGCGCTGAGG GAGCCATGAC CATTGCGATC 
GCCGATCGCT GGACTGGCAG TACCTTTACC GTAGACGCCT CGGCAGTGCT CGATACTGAC 
GCAAACCTCT CTACTGGTGG TGCAGCAATC TCTGTTGAGT ATGGAGATAC CGCTACATTG 
CTGATCCATG GTACACAAAA CAGCGATACC ATCATCGGCG GACGTGGAAC AGACACCATT 
AATGGCTGGG CCGGTAACGA CATCATCGTT GGTGACGAAG TAACAAATCA GCCAGAGCTG 
GAAGTTGTAA CCTTTGCAGC AACGTATGAT GCCGGGGATG TGATTACGGT TACGCATAAC 
GGTCAATCCA TTATTGCAAC AATCGGTACG GACGGAGTAA ACGGTGCCGC AGTTGCAACT 
GCGATTGCAG CATATGATGG TGCTGGATCA GACGGTTTGG CAGATAGCAT CACAACGGCA 
GGTACGCAGT TTGGTTCTGC TACTGCTGTT GCTGCTGCTG ACAAGCTTCG TTTGACCGGT 
GCAGTTGCTG GTACAGACTA CACGGTAACA GCTACGACGA ACAATGCCGG TGACAACACG 
CCACAGATAC AGACCTTGAC GGTTTCACGT ACTGGGAGTC TTAACCCTTT TGATAATGAT 
ACTGAGACTG TTGAAGTTCA ATGGGAAGGT ACCAGTTACC AAATCGCGAC CGTAAAAGAA 
CAATCATTAC CAAATGAAGT TGTAATTACC TATCTCCCTG GTAAAACAGC TTTTGACGCA 
GCAGTATCAG CAGCTGGATG TACCGCTGTA TCAGTAATTT CAGGTACTAC ACCTACAGCG 
ACTCTTACTG TAACTGTAAC AGGTTTGCCA ACAGGTGCTC CGTTCGATCC GATGATAGTA 
AATATCCTTG CTGGTACTTA TGCGGGTCAA CAGACGACAA TGAATTTAAG CACGGTCCCT 
GGAGATCTGG GATTTGTTCA GCCTGATCCG AGTGTGGCTA CTGAAACCGT GGCTCGTTCG 
GTTATCGGCG CTGCTGATAC CATCAACGGT GGTACCGGTA ATGACAACAT CTCCGGTTTG 
ATTGGCGCTG ACGTTCTTGA CGGCGGTGAG GGAATCGATA CCGTGAACTA CAGCCTGAGC 
CTCGCGGCGG TAACGGTGAA CCTTGCAACA AACGTTGTTT CCGGTGGTGA TGCCCAGGGC 
GATACCATCA GCAACTTCGA AAACGTGACG GGTTCAAACT ACCACGATGT TCTCACGGGC 
AGCGATGCAG CGAACACTCT GGATGGCGGT GCTGGTCACG ACACGATTTA TGGTGGCCTT 
GGTGCTGACT TGATTCTTGC CGGTGAAGGT CAGGACGTTG TTGACGGTGG CGCTGGTATT 
GACACCATCA ACTTGACTGA GTCTGGTGTT GCTCCTTCAG TTCAGGTTAA GGATACGGTG 
AGTTCTGATG TTATCTCTCT TGTCAATGCT GACCTGATCA CAGGTTTCGC TTCCGGCACA 
GACAAGTTTG ATTACAATGG TGCATTGTTG AACGGTCTGG GTACAAACGC TGATGGCATT 
GCAGGTACTG ATGTTATCAC TGCTGCGACA TTTGCTGCTG GATTGGGTGA CCCTCTTAGC 
ACTGCCGGTG TCGTATTCAT CGCTCAAACC GGAGTTGGAA GCGCGGTATT TGCAAATGTG 
CTTGCATCTA CTGCTTCTAA CTTGACGACT AACTACGCTG CTCTTGAGGC TCAGTTGCTG 
GGTGCTGGTG GTGCATTGAA CGGTACTATT GTCGGCCTTG ATGCTGTTCT GACTCCTGCA 
GACAGTGCGC TGCTGGTACT CGATAATGGT GTTGGTTCTG TCGTCTTGCG TATAACCAAC 
ACAGATGCAA CATTGGACAC CTTGTCAGCA AATGAGGTGG AGTTGGTTGG TGTATTTGTT 
GACACTCCAG CTTTGGCAGC GGCTGACTTC ATCTAA 

 

Protein sequence

MSLIPPSITT GSLESWEYFA SYGDLRGWAL LDGVLNAADS TNAAWHYNMH ASAENRSIVF 
DAWEYLASNI DLMNWLGADG ITDADAIKAA QHYITNGAAE GRSMGTFDSA AYLAANADLR 
DWLGATNYDA AAKHYIQFGR AEIAAGTPGR LLRLDNSFTL TTDDDTATAN VFNSAPKLVP 
GTGYLTTLSD NDVLTGIGTN PTLNVEIGTQ TDFTSEEAMI QPTLNGITTV NVAWTSDDVT 
ELILADADLL QTLNVTRITA TNASVKHTEL SATVSTITLN DATRSGTVDF TTREEVLTGT 
SDVLAFGVNN VRVHKVTLNE GGDNDADLGF YYETINMASN ATNDVDALTI GANTREDLQN 
DLPSGTTTQT LSITAGASVG AAGSLEINQL TANGLETINI VANHRVDIVK DKLLPLSPGN 
DGISTNDLET VNISGAANVM IDGLDTTKQD AGVVLTVNAG TMTGNLKLGV QTPSDGNPST 
LYAFRADEDL KVTSGSGNDQ IHTYGVLAGD ISTGSGNDVV AIRGCEMGSA DVEGVSQIDT 
GTGNDSVTAA SLLVTAHDKD ESNNTGFDDV TAASIVTGDG NDSVTVTSLT SGSDWDNITL 
TDGNKNDQQK KIGAIVNTGT GTDAVIFTMV AEGALVDTGA DNDTVSAGLT DYATILAGDT 
DADVQTLVDA THGDSGNAYT DEVSSLGVID RLGAIVDLGA GANDVINFTE SDAGIADTMS 
SAPTETTRSA FTIVGRDAEL RGAETMNVTA LDDVNVDVLT TMADQDTTMA GSQTDLNVNI 
IGTQILNLTV ANQIEDTDTA DTIVQHTNGF HAVNDNNATD GAITTDVMRF DAALATINLA 
SQEKWLETGP ATESYEAGTK TTFTLNNMRE GVALTLSAFE ATGVTGGALV DDSVLAISTT 
DQDTLTGGVQ VTGAITTNAP ATDVYLNINY DGARDLNDAA ALTINAAEAF DLSLNVDSHV 
ATDTVGNAAS TTDDDTTLVE NFTLTFSDAN AHSVDMNGFG DFNFRATRAP LVAGDVSSTA 
VTSFTLNSGA AAGAGIEVNN VNADTIRVNN AAGTAVTAAN VTLRVDVDNN YNIATGSGTD 
IIDMRLDDVR SDDTVSALNR ADTVSAGDGR DTLIVDGNDD LGTNDNAGVS PSMIVNDDVF 
MNLDSIETIL VDTATANNGG NGDLTITIDE QAGTGAGNTN VDTIRMIGNQ DNRLDLLIGN 
NFTVGSTVNT QNIAGGALLI DLNAHLAQTT LNIESKDDDT DIQFVNMDIQ VAAKGGTIMN 
MVNSGSQTAT VEVRVYTADE NDAHVISSSN TGTGDGNVDI NTGYVGSAAT LAAGAFDKLV 
LVEGATANDG GAEGAMTIAI ADRWTGSTFT VDASAVLDTD ANLSTGGAAI SVEYGDTATL 
LIHGTQNSDT IIGGRGTDTI NGWAGNDIIV GDEVTNQPEL EVVTFAATYD AGDVITVTHN 
GQSIIATIGT DGVNGAAVAT AIAAYDGAGS DGLADSITTA GTQFGSATAV AAADKLRLTG 
AVAGTDYTVT ATTNNAGDNT PQIQTLTVSR TGSLNPFDND TETVEVQWEG TSYQIATVKE 
QSLPNEVVIT YLPGKTAFDA AVSAAGCTAV SVISGTTPTA TLTVTVTGLP TGAPFDPMIV 
NILAGTYAGQ QTTMNLSTVP GDLGFVQPDP SVATETVARS VIGAADTING GTGNDNISGL 
IGADVLDGGE GIDTVNYSLS LAAVTVNLAT NVVSGGDAQG DTISNFENVT GSNYHDVLTG 
SDAANTLDGG AGHDTIYGGL GADLILAGEG QDVVDGGAGI DTINLTESGV APSVQVKDTV 
SSDVISLVNA DLITGFASGT DKFDYNGALL NGLGTNADGI AGTDVITAAT FAAGLGDPLS 
TAGVVFIAQT GVGSAVFANV LASTASNLTT NYAALEAQLL GAGGALNGTI VGLDAVLTPA 
DSALLVLDNG VGSVVLRITN TDATLDTLSA NEVELVGVFV DTPALAAADF I