| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2578 |
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| Symbol | |
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| ID | 6463705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2644544 |
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| End bp | 2645545 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642728735 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002019357 |
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| Protein GI | 194337563 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGATA TGGGTGAAAC AGTATTGGTG ACGGGTTCAA CCGGTTTTAT TGGCGCTCGA
TTGTTGCGCT ATCTTGCCGC AGAGGATGAG AGGGTGAGGG TCTATCTTCG CCCTGAGAGT
AATGAGAGTG CTTTGCCTGA TGGGGTAGAG GTTGTACGGG GCAGTTTTGG CGACATGGAG
GCTCTTGGGC GTGCGGTTCG GGGTGTTGAC CGGATTGTCC ATCTTGCCGG GGTGACGAAG
GCTCTTGACG AGGCGGGTTA TGATGCGGGT AATGTGTTGC CGGTAGAGAA TCTGCTTGCG
GCGGTGAGGG AGCATAACCC CGGTCTGAAG CGTTTTCTCC TGGTCTCGAC TCTTGCGGTT
GCCGGTCCGG CTTCAGAAGG GATATGTGGT ATGAAGGAGT GTGACCTCCC CTCTCCGGTT
AGTGCATATG GGCGCAGCAA GCTGCGGGCG GAGAGGCTCT GCCTGGAAAG TGCGGGGGAT
ATTCCGATTA CCATCGTACG CCCTCCTGCG GTCTACGGGC CGGGTGACCG TGATGTTCTG
CAGGTGTTTC AGATGCTCTC CAAAGGGGTA CTGGTGTCGG CGGGAAATGT GGCAAGGCAG
CGTTTCAGTC TTGTTTATGT TGATGATCTT GTTTGTGGCC TGATGATGGC GGCTCGTTCG
GAACGGGCTG TGGGAGCTAT TTATTATATC ACGTCATCCC GTTCGTACTC GTGGGATGAG
TTTATTGCTG CCGTGCAACC GGCGCTTGGT TTTCGGAAGA TCTACCGCTT TTCGTTGCCG
CAGCCACTCC TCTTTCTGCT TGGCGCGTTC ATGGGTGCGG TGGGCTCTTT ACGTGGAAAG
GTTGCGCTCA TCAATCGTGA CAAGGCTTAT GAACTGGTGC AGGATTACTG GGTCTGTTCC
TCCGCTCAGG CTGAAATGGA TCTTGGTTTT ACAGCCAGCA CAACCCTCGG CGAAGGTATT
GCAAAAACGA TCTCCTGGTA TCGCCGCAAG GGGTGGTTGT GA
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| Protein sequence | MGDMGETVLV TGSTGFIGAR LLRYLAAEDE RVRVYLRPES NESALPDGVE VVRGSFGDME
ALGRAVRGVD RIVHLAGVTK ALDEAGYDAG NVLPVENLLA AVREHNPGLK RFLLVSTLAV
AGPASEGICG MKECDLPSPV SAYGRSKLRA ERLCLESAGD IPITIVRPPA VYGPGDRDVL
QVFQMLSKGV LVSAGNVARQ RFSLVYVDDL VCGLMMAARS ERAVGAIYYI TSSRSYSWDE
FIAAVQPALG FRKIYRFSLP QPLLFLLGAF MGAVGSLRGK VALINRDKAY ELVQDYWVCS
SAQAEMDLGF TASTTLGEGI AKTISWYRRK GWL
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