| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2574 |
|---|
| Symbol | |
|---|
| ID | 6461680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2640537 |
|---|
| End bp | 2641763 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642728731 |
|---|
| Product | arsenite-activated ATPase ArsA |
|---|
| Protein accession | YP_002019353 |
|---|
| Protein GI | 194337559 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0003] Oxyanion-translocating ATPase |
|---|
| TIGRFAM ID | [TIGR00345] arsenite-activated ATPase (arsA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.295294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTT TAACTTTTAC AGGTAAAGGC GGGGTAGGGA AAACCAGCGT TTCTGCGGCT
ACGGCTGTCC GTTTGTCGCA ACTGGGCTAT CGTACCCTTG TTCTTTCAAC CGACCCCGCA
CATAGTCTTT CGGATTCCTT TAACCTGCCT CTTGGCGCTG AACCGACAAA GATAAAGGAG
AATCTTCATG CCATTGAGGT GAATCCTTAT GTTGACCTGA AGCAGAATTG GCAGTCTGTA
CAGAAATACT ACTCCAAGAT TTTCATGGCT CAGGGCGTTT CAGGTGTTAT GGCTGATGAA
ATGACCATTC TTCCCGGCAT GGAAGAGCTG TTCTCTCTTT TGAGAATCAA GCGCTACAAA
GCCTCCGGTC TCTATGATGT GCTGGTGCTT GATACCGCCC CGACGGGTGA AACCCTGCGC
CTCCTCTCTC TTCCCGATAC GCTTGCCTGG GGCATGAAGG CGGTGAAGAA TGTTAACAAG
TATCTTATCA AGCCGCTCAG CAAGCCTCTT TCAAGGATGT CGGATAAAAT TGCTTTTTTT
GTGCCTCCGG CAGATGCCAT TGAGTCGGTT GATCAGGTTT TTGATGAGCT TGAAGACATT
CGTGAAATTC TTACGAATAA TAAAAAATCG ACGGTACGCC TTGTTATGAA TGCGGAGAAG
ATGTCGATCA AGGAGACCAT GCGTGCCTTG ACCTATCTGA ATCTTTACGG TTTCAAGGTG
GATATGGTTC TTGTCAACAG GTTACTTGAT ACCAAAGAGG ACAGTGGATA TCTGGAGAAC
TGGAAAGCGA TTCAACAGAA GTACCTCGGA GAGATTGAAG AGGGCTTTTC TCCCCTTCCG
GTGAAAAAAC TGAGGATGTA CGAGCAGGAA ATTGTCGGTC TGAAGTCCCT GGAGATGTTT
GCCAAAGATA TGTACGGCGA CAGCGATCCG TCTGATATGA TGTATGACGA ACCACCGATC
AAATTTGTCC GTAACGGCAA TGTCTATGAG GTACAGTTGA AGCTGATGTT CGCCAACCCT
GTCGATATTG ATGTATGGGT AACAGGCGAC GAGTTGTTTG TACAGATCGG CAACCAGCGT
AAAATCATCA CCCTTCCGAT CAGCCTGACC GGGCTTGAAC CGGGCGATGC GGTATTTAAG
GACAAATGGC TTCATATACC CTTTGATCTT GATCGTCACG AGCAGAGCCG CCTGCAAAAA
GAACAGAAAG CTTATGACAG GGGATAG
|
|---|
| Protein sequence | MRILTFTGKG GVGKTSVSAA TAVRLSQLGY RTLVLSTDPA HSLSDSFNLP LGAEPTKIKE
NLHAIEVNPY VDLKQNWQSV QKYYSKIFMA QGVSGVMADE MTILPGMEEL FSLLRIKRYK
ASGLYDVLVL DTAPTGETLR LLSLPDTLAW GMKAVKNVNK YLIKPLSKPL SRMSDKIAFF
VPPADAIESV DQVFDELEDI REILTNNKKS TVRLVMNAEK MSIKETMRAL TYLNLYGFKV
DMVLVNRLLD TKEDSGYLEN WKAIQQKYLG EIEEGFSPLP VKKLRMYEQE IVGLKSLEMF
AKDMYGDSDP SDMMYDEPPI KFVRNGNVYE VQLKLMFANP VDIDVWVTGD ELFVQIGNQR
KIITLPISLT GLEPGDAVFK DKWLHIPFDL DRHEQSRLQK EQKAYDRG
|
|---|
| |