Gene Ppha_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2562 
Symbol 
ID6462279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2629599 
End bp2630777 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content53% 
IMG OID642728719 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002019341 
Protein GI194337547 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTC CTTATTTTGC CCGGAATCGT TGTTCTGCCT ACAGCCATCA TTCCGCCATC 
ACCATCCGTT CTTGCCGCAT TGCGAAAATA GAAGAAAACA ATAGCCGCGA AATTCTTATT
TTTGCGAACA GTGAAGCTCT CGCTGTTGTT TACATCTTTG CAGCCGGGCT CTTTTTTTAT
TTTCACCGTT TCATGCCTAA CTCATCAATT GTCATAACCG GGGCTACCGG ATATATCGGT
TCCCAGATTC TTCTTGCGCT GCTTGCACGC TTTCCCGGAG AGCGTCGCTG CAGGGTGATT
GCCCGGAAAA GCTCGGATTG CTCTTTTCTG GAGAGCTTGC CTGTCGAGAT TGTTCGGGCG
GATATGCTTG ATCCTCTTGC CCTTCTTGAG GCTTTCAGGG GAGCGGAAAC GGTCTTTCAT
TGTGCGGGAC TTATCTCCTA TACCAGACAC TCCCGAAATG CGCTCTATGA GGCCAATGTG
GTCGGGACAA GAAATGTGGT CAATGCCTCC CTGCACCATA AGGTGCGCAG GCTTGTTTTG
ACCAGCTCCA TTGCCGCCAT CGGCGCCTCC GAGGATGGTT CGCCAGCCAG TGAGTCATCC
ACCTTTCAGG AGTGGCAGCG ACGGAATGGT TATATGGAGT CGAAGCATCT TGCTGAACTT
GAGGGGCTGC GCGGAGTTGC AGAGGGCCTT GAAGTGGTCA TGGTTAATCC TGGTGTGGTT
ATTGGTGTTG ACCGCCGGAA TCCCGCTTCG GTCAGTTCTT CGAACGAGGT ATTGCGCCTT
GTCTATCAGG GAAAGCTGCC CTTCTTCCCT TCGGGAGGCA CCGGTTTTGT TGATGTCCGC
GATGTCGCTG ATGCTCACCT GGCGGCTTGG GAAAAAGGGC GTTCAGGGGA GCGTTATGTT
GTGGTTGGCA GCAATCTGAC CTTCCGGGAG CTTTTTGCCC GCATAGGGAC TCTTTCTGGC
AGCAGCAGTG GCCGGGCATT TATGGTGCCG GATGCTCTTG GTCTGCTTGC CGGTCTTGGC
GGAGAGCTTT GGTCGATGCT CTCGAACCGT CCCTCCTTTA TCAGCCTCGA GAGCATTCGT
ATCGCCTCAA GGATTCTTGC GTTCAGTAAT ACCCGCTCAG AGCAGGAGCT TGGTTTGTGT
TACCGCGAGC TGTCCGAAAC GCTCAAGACT CTGCTCTGA
 
Protein sequence
MKAPYFARNR CSAYSHHSAI TIRSCRIAKI EENNSREILI FANSEALAVV YIFAAGLFFY 
FHRFMPNSSI VITGATGYIG SQILLALLAR FPGERRCRVI ARKSSDCSFL ESLPVEIVRA
DMLDPLALLE AFRGAETVFH CAGLISYTRH SRNALYEANV VGTRNVVNAS LHHKVRRLVL
TSSIAAIGAS EDGSPASESS TFQEWQRRNG YMESKHLAEL EGLRGVAEGL EVVMVNPGVV
IGVDRRNPAS VSSSNEVLRL VYQGKLPFFP SGGTGFVDVR DVADAHLAAW EKGRSGERYV
VVGSNLTFRE LFARIGTLSG SSSGRAFMVP DALGLLAGLG GELWSMLSNR PSFISLESIR
IASRILAFSN TRSEQELGLC YRELSETLKT LL