Gene Ppha_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2559 
Symbol 
ID6462537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2626414 
End bp2627439 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content55% 
IMG OID642728716 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_002019338 
Protein GI194337544 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.894195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTC AGGATTCTCG CTGCCGAGTG GCGGTACTTG GTGCAACCGG TCTGGTCGGT 
CGCACGATGA TCAAGGTTCT TGAAGAGAGA AATTTTCCTG TAACCGAGCT TGTTCCGCTC
GCTTCATCAA GAAGTGTCGG TCAGGTGGTG ACCTTCAGGG GCAAAGAGTT CATTATTCGC
GAGCCCTCTG CCGAAGCATT CGAGGGAGTT GATATCGCCC TTTTTTCCGC AGGCGCAACA
GCGAGTAAAG AGTGGGCAGT CGTTGCGGCC GCTGAAGGAG CGGTTGTCAT CGACAATTCA
TCGGCATTCC GCATGGAGCC CGATGTGCCT CTGGTTGTGC CTGAGGTCAA TCCCGAAGCC
ATTTTCAGGG CAGACGGCAC CCCGGAACGG ATCATTGCCA ATCCCAACTG TTCAACCATC
CAGATGGTCG TAGTGCTCAA GCCGCTGCAT GACCGCTTCG GTGTCAAACG GGTAGTGGTT
TCGACCTACC AGTCAGTCAC CGGAAAAGGA AAGATCGGAC GCGACGCCCT TGAAAGCGAG
TTGGCGGGAG AGAGCCAGGA GCAGTTCACC CATTTTCACC AGATCGCCTT CAACGCCGTG
CCGCAGATCG ATGCCTTCAC CGATAACGGC TACACCAAGG AGGAGATGAA GATGGTCAAC
GAGACCCGCA AAATCATGGG CGACAAGAGC ATGAGCATCT CTCCCACCAC TGTGCGCATT
CCGGTCTACG GCGGCCACGG CGAATCGCTC AACATCGAGC TTGAGCATGA ATTTGATATC
GACGACGTGC GTGAACTCCT TCGCACCTCA CCCGGCATTA TCCTGCAGGA CGACCCTTCA
GCACGCATCT ACCCCATGCC GCTCACCTCA TACGAGCGCG ACGATGTTTT TGTTGGCAGA
ATCCGCCGTG ACTACTGGCA TCCCCAGACT CTCAATATGT GGATTGTCGC CGACAACCTC
CGCAAAGGTG CCGCCACCAA TGCCGTGCAG ATTGCAGAAG TGATTGTCAA TCAGAAAAAA
GCGTAG
 
Protein sequence
MSSQDSRCRV AVLGATGLVG RTMIKVLEER NFPVTELVPL ASSRSVGQVV TFRGKEFIIR 
EPSAEAFEGV DIALFSAGAT ASKEWAVVAA AEGAVVIDNS SAFRMEPDVP LVVPEVNPEA
IFRADGTPER IIANPNCSTI QMVVVLKPLH DRFGVKRVVV STYQSVTGKG KIGRDALESE
LAGESQEQFT HFHQIAFNAV PQIDAFTDNG YTKEEMKMVN ETRKIMGDKS MSISPTTVRI
PVYGGHGESL NIELEHEFDI DDVRELLRTS PGIILQDDPS ARIYPMPLTS YERDDVFVGR
IRRDYWHPQT LNMWIVADNL RKGAATNAVQ IAEVIVNQKK A