| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2553 |
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| Symbol | |
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| ID | 6463716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2620168 |
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| End bp | 2621541 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728710 |
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| Product | Cysteine synthase |
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| Protein accession | YP_002019332 |
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| Protein GI | 194337538 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG0031] Cysteine synthase
[COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
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| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACC ACGATATATT CGGGCTTGCC ACAGAAACAC CGATGGTTTC TGTAAAGCAG
ATGGCCCGCC AGATCAGCCC GAAGGTCATG GCTAAACTTG AGTACATGAA TCCGGCCTGC
TCGCACTATT ACCGGGTGGC TTCGGCCATT GTCAGGGATG CTGAAGAGCG CAAGCTGATC
CATCCGGGCA TGACTCTTGT GGACTGGACT TTTGGTAACA GTGGTATTGC CCTTGCCATG
GCTGGAGTGA GTCGCGGTTA CAAACTGCTG CTGGCAGCTC CTGATAAAAT ATCGCAGGAG
AAGCAGCATA TGCTTCGTGC TCTTGGTGCA GAACTGGTCA TTACCCCTTC GGATGCTTTG
CCCGGAGAAG AGCGCAGTTG CATGAATGTG GCTGAAAGCC TGGAAAGAAG TATCAGCAAC
TCTTTTTTCA CCGGAATGTA CAAGAACCCT CTCAGTCTGA AGGTGCACAG AGAAGCTACC
GGCAGCGAGA TTTATCGCCA GACAGAGGGG CGGGTTACCC ATGTTTTTGT GCCAATGGTT
TCGGGCGCCA TGGTTTTTGG TATCGGTGCG TTTCTGAAAG CAAAGAACCC GAAAATTCAG
ATTATCGGTG TTGAATCGCA GGGTTCAATT TATGCCTCTC TCTTCAGGGA TGGTATGCCC
GGAGATCCGG CTCTCTCCGA ACTTGAGGAA CTTGGCTCCC GGCAGCCATC GGCTTTCTGG
GATCCATCGG TTCTTGATGA TGTGGTACAG GTGAGCGATT ATGATGCTTT CAACTGTGCC
AGGGAGCTCT TGCGGATGGA GGCTGTTTTC GGTGGAGGTG CATCGGGTGC AGCGATGGCT
GCCGCGCTTC GGGCTGGAGC ATCATATGGC CCGGACGACT GTGTGGTTGC GGTGATGAAT
GATTTTGGCG GCTATTATCT GAGCAAGATG TATCGTGATG AGTGGATGCG TAAGCACGGC
TTTTATCGTA AGGTAAAATC GGCTCTTGAG CAGATTACGG CTGAAGATAT CCTGCACTTG
AAGGTACGCA GGGATCTGAT TTTTGCCTAT CCGGAAAATA CGCTTGCCGA AGTCTTTGAG
ATGATGAAGC AGAGCGATGT CTCCCAGCTT CCGATCGTAT CCTATAACGC TCCGATTGGC
AGTATCAGTG AAAACAAGAT CCTCTCCATT CTTATAGAAA ACGATGATGC CATGAATGCA
AAGGTTGTCG GTTTTATGGA GAGGCCTTTT CCGGTATGTC GGCTTGATGC AACGATTTCG
GAATTATCCG ATAAACTGCA GCAAAGTGCA TCCGGAGTGC TGATAAGTTT GTCTGATGGA
CGCTTGCAAT TGCTTACAAA ATCAGATCTT ATTGATGCAT TGACCCATAA GTGA
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| Protein sequence | MSNHDIFGLA TETPMVSVKQ MARQISPKVM AKLEYMNPAC SHYYRVASAI VRDAEERKLI
HPGMTLVDWT FGNSGIALAM AGVSRGYKLL LAAPDKISQE KQHMLRALGA ELVITPSDAL
PGEERSCMNV AESLERSISN SFFTGMYKNP LSLKVHREAT GSEIYRQTEG RVTHVFVPMV
SGAMVFGIGA FLKAKNPKIQ IIGVESQGSI YASLFRDGMP GDPALSELEE LGSRQPSAFW
DPSVLDDVVQ VSDYDAFNCA RELLRMEAVF GGGASGAAMA AALRAGASYG PDDCVVAVMN
DFGGYYLSKM YRDEWMRKHG FYRKVKSALE QITAEDILHL KVRRDLIFAY PENTLAEVFE
MMKQSDVSQL PIVSYNAPIG SISENKILSI LIENDDAMNA KVVGFMERPF PVCRLDATIS
ELSDKLQQSA SGVLISLSDG RLQLLTKSDL IDALTHK
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