Gene Ppha_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2546 
Symbol 
ID6463730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2614371 
End bp2615105 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content49% 
IMG OID642728703 
ProductABC transporter related 
Protein accessionYP_002019325 
Protein GI194337531 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.651086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA CACTGAGCTG TAACAAGCTA AAGAAGATCT ACAATAAACG CGAAGTTGTC 
AAAAGCTCAT CTATTGAGGT AAAACAGGGA GAAATAGTTG GGCTTCTTGG ACCAAACGGT
GCAGGAAAAA CCACGACCTT TTACATGATT GTGGGGCTGG TTCGGCCTGA TGGTGGTGAT
GTCTTTCTCG ATTCAGCAAA CATCACCCAA CTGCCTATGT ACAAACGGGC ACGTCTTGGT
ATCGGCTACC TCCCCCAGGA AGCATCGGTC TTCCGAAACA TGACGGTCGA ACAAAACATC
TTGAGCGTGC TTGAATTCAC CTCCCTCTCC AAAGCAGAAC GCAAGGAGAG AACCAGCATC
ATGCTTGAGG AGCTGAACAT TACGGCTATC CGTAAAAGCA TGGGTTATGC GCTCTCCGGT
GGCGAACGCC GACGCACGGA AATAGCAAGG GCCCTTGCGC TCAATCCCAA ATTCATTCTG
CTCGACGAAC CCTTCGCCGG AGTTGACCCG ATTGCTGTTG AAGATATCCA GCAAATTGTT
GAAGGGCTTG CCAAACGCGA CATCGGTGTA CTTATCACCG ACCATAACGT CCACGAAACC
CTCTCCATTA CTCATCACGC CTACCTCCTC TTTGACGGAA GCATCTTCAT GCACGGCACC
CCTGAAGAGA TCGCTTCCAA TCCAGAGGTC AGAAAAATGT ACCTCGGAGA AAAATTCACC
CTCGAACGGT ATTAA
 
Protein sequence
MKATLSCNKL KKIYNKREVV KSSSIEVKQG EIVGLLGPNG AGKTTTFYMI VGLVRPDGGD 
VFLDSANITQ LPMYKRARLG IGYLPQEASV FRNMTVEQNI LSVLEFTSLS KAERKERTSI
MLEELNITAI RKSMGYALSG GERRRTEIAR ALALNPKFIL LDEPFAGVDP IAVEDIQQIV
EGLAKRDIGV LITDHNVHET LSITHHAYLL FDGSIFMHGT PEEIASNPEV RKMYLGEKFT
LERY