| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2496 |
|---|
| Symbol | |
|---|
| ID | 6463648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2585322 |
|---|
| End bp | 2586401 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728674 |
|---|
| Product | hydrogenase/sulfur reductase, beta subunit |
|---|
| Protein accession | YP_002019296 |
|---|
| Protein GI | 194337502 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTACA AAGTCATTTC CAAAGAGGAG TTCACAAAGT TTATAGGGGC CCTGGTCGAA
AACAACCGCT CTTTCGGGCC CAGGGAGGTT GATAGAGATC ACCGTGGCAA TCCTGTTTAC
CAGTTCCAGC CGGTACAGTC GGCCCGTGAT ATCGCCTTCG ACTATACCGC CACGGCATCG
TCGGCGAAGC ATTTTTTTCT TCCTTTCCGC GAAGAGTTGT CGCGTTTTCT TTTTCGCGGG
GATGACTGGG AACAGCAGAT TGCCTACGAA GCAACACCGA TAGTGCTCAT CGGTCTGAGA
GCATGTGACA TCAGCGCCCT GAACATTCTT GACGACGTCC TGCTCAACGG CCATTTTCCA
TCACCCTACT ATCTGGCCAA ACGCAAAAAC ACCTTTGTTA TCGGCATGGA TCATCTGCCC
CTGCCGGACT GTTTCTGCAA ATCGATGAAC CATCATACGG TCACGACCGG CTTCAACCTC
TTCTGTTCGG ATATTGGCGA CCACTACTAC CTCTCGATCA ATTCGTCAAA AGCATTTAAT
TTTCTCAAGG AGTTCGAGAC CCGCGACCCA AATTATGACG ATAATTGCGC CCTTGTTGAG
CGGCGCAAAC AGATACAGAA TGGTTTTGAA ACTGAAATTG ATGTCACGGG GCTTCCAACC
ATTCTCGACA TTGAGTTCGA CTCCACCGTC TGGGAAAAAT GGGGCAATAA ATGCCTGAAC
TGCGGAAGCT GCGCCATGGT GTGCCCCTCC TGCTACTGCT ACTCGGTCAC GGAATCATTC
GACACCAGCC TGAAAGTGGC TTCACGCGAA AAAAAGCTTT ACTCCTGCAA TCTTGTTGAT
TTCGCAGTTG TTGCCGGCGG ACACAATTTT CGTCCGAAGA ACGGCGACCG ACTGAAATAT
CGCTATTATC ACCAGCACCG GGGATTTGCC GAAAACGCCA ATCAGCAGAT CTGTGTGGGA
TGCAATCGGT GCGGCAGGGC ATGCCTTGCC GGGATCAACC CGAAAGAAGT GATCAACGAC
CTCAGAATGG AGAAAGAATC ATGCATGATC TGCGTTTCGT CATCCCCTGC CAGGACATAA
|
|---|
| Protein sequence | MIYKVISKEE FTKFIGALVE NNRSFGPREV DRDHRGNPVY QFQPVQSARD IAFDYTATAS
SAKHFFLPFR EELSRFLFRG DDWEQQIAYE ATPIVLIGLR ACDISALNIL DDVLLNGHFP
SPYYLAKRKN TFVIGMDHLP LPDCFCKSMN HHTVTTGFNL FCSDIGDHYY LSINSSKAFN
FLKEFETRDP NYDDNCALVE RRKQIQNGFE TEIDVTGLPT ILDIEFDSTV WEKWGNKCLN
CGSCAMVCPS CYCYSVTESF DTSLKVASRE KKLYSCNLVD FAVVAGGHNF RPKNGDRLKY
RYYHQHRGFA ENANQQICVG CNRCGRACLA GINPKEVIND LRMEKESCMI CVSSSPART
|
|---|
| |