| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2488 |
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| Symbol | |
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| ID | 6463661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2576972 |
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| End bp | 2577760 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728666 |
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| Product | Patatin |
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| Protein accession | YP_002019288 |
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| Protein GI | 194337494 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA CTGCTCTTGC ACTCGGGGGA GGAGCTGTCC TCGGTGCCGC TCATGTTGGT
GTGCTGAGGG CGCTGGCTGA ATTGCAGATT TCGGTATCCA TGGTCAGTGG CACCAGTATT
GGCGCCTTTA TTGCTTCGCT CTATGCTTTT GGCAAAAGCT GGCAGGATAT TCGCGATATT
GCCTTTTCTA TGGACTGGTT TGATCTGTCG AGTCTGTCGC TTTCGCAGTA CGGTATCCTG
ACGAATAAAA AATTTGGCGG TATTGTAACT GAGCTGCTCG GAGAGAAAGA TATCAAAGAC
GCCTTGATCC CGCTTTTTAT GGTCGCAACC GATATTGGAA CCGGCAAAAA AGTTGTTTTC
AGCGAAGGGA ATGTGGCTGC TGCGGTGATG GCAAGCAGTT GTATTCCCGG TATTTTCAGA
CCAGTTGATT ATTCCGGTGC GCTCCTTGTC GATGGTATGC TTGTGGAAAA TGTTCCCGTC
TCCCCACTTG TGGAAAATGG TGCGGAATCG ATTGTCAGTG TTGATCTTCT GGCCTTTCAT
GTTTTCAAAA AACCTGAAAA TATTATCGGA ATTTTGCTGA ACGCATTTTA CAGTTCGCTT
ACCAATACAA CAGCCATACA GATAGCCGAT GCAGATTTAT CTATTTCGCC AAATCTGTCG
AAATTCAATC TCATCGATTT CGACCAGATT CCTGATCTCA TTGAGGCGGG TTACCAGGCA
TCCTTACCCG TGCTGAAAGA ATGGGTGGCA GGAATGAGGA ACGCCTCCGG CTTGGTCGAG
TTGGAGTAA
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| Protein sequence | MKKTALALGG GAVLGAAHVG VLRALAELQI SVSMVSGTSI GAFIASLYAF GKSWQDIRDI
AFSMDWFDLS SLSLSQYGIL TNKKFGGIVT ELLGEKDIKD ALIPLFMVAT DIGTGKKVVF
SEGNVAAAVM ASSCIPGIFR PVDYSGALLV DGMLVENVPV SPLVENGAES IVSVDLLAFH
VFKKPENIIG ILLNAFYSSL TNTTAIQIAD ADLSISPNLS KFNLIDFDQI PDLIEAGYQA
SLPVLKEWVA GMRNASGLVE LE
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