| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2486 |
|---|
| Symbol | |
|---|
| ID | 6463670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2575811 |
|---|
| End bp | 2576281 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642728664 |
|---|
| Product | YbaK/prolyl-tRNA synthetase associated region |
|---|
| Protein accession | YP_002019286 |
|---|
| Protein GI | 194337492 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2606] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTATCC GTAAATTGAG GGAGTTTCTT GACAGCCATG CCGTCAGGTA TTTCGTGGTC
AGCCACTCTG CAGCCTATAC GGCTCAGGAA ATAGCCGCAG CGGCTCATGT TCCCGGAAAA
GAGCTCGCTA AAACCGTCAT TGTCACCATT GCCGGAAAAA TGGCGATGGT TGTTTTGCCG
GCTTCCCGTC AGCTCGATTT TGAGCTTTTG CGTGAACTGA CAGGTACCCG GGACGTTGAA
CTTGCAGACG AGAAAGAATT TTCCGGACTT TTTCCGGAAT GCGAACCCGG CGCCATGCCC
CCTTTCGGCA ACCTCTATGG TATGGATGTC TATGTTTCGG AAGAACTTGA GGATGATGAT
GAAATTGCTT TCAATGCCGG AGCCCATACC GAGCTGTTAC GGTTGTCCTA TGAAAGTTAC
AAAAGATTGG TTCATCCCAT TGTTGCGAAG CTCTCTCTGG GGGTGAAGTG A
|
|---|
| Protein sequence | MPIRKLREFL DSHAVRYFVV SHSAAYTAQE IAAAAHVPGK ELAKTVIVTI AGKMAMVVLP
ASRQLDFELL RELTGTRDVE LADEKEFSGL FPECEPGAMP PFGNLYGMDV YVSEELEDDD
EIAFNAGAHT ELLRLSYESY KRLVHPIVAK LSLGVK
|
|---|
| |