| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2477 |
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| Symbol | |
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| ID | 6463678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2564835 |
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| End bp | 2566001 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642728655 |
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| Product | CapA family protein |
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| Protein accession | YP_002019277 |
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| Protein GI | 194337483 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAATA TTTGCAAGGG CTCGTTCTGG AAGTCACTCT TCCTGCCCAT AGTACTCCTG
TCATTGGTCA TACCATTGCA CACGGCAACA TCCAGAGTGT CAGACAAGCA ACTTCTGGCA
GCGCCGGAGA TCGTTAACGT CAGGAAAAAA GCGCTCATCA CCGGGGATGC AACGCTGACC
ATCGTGGCTG TAGGGGATAT AATGATGGGA TCCACTTATC CCTCATCTGA TTATCTTCCA
CCAAAGCATA AACGGCTGTT ACAGCCACTC TACACCATCC TTAACGATGC GGATCTTACG
TTTGCCAATC TGGAAGGCCC TGTTTTAAAT AGCGGAGGAA AGGTCAAGCA ATGCTCAGAT
CCGGCCAAAT GTTTTGCCTT CCGTCAGCCA GAATCTTGTC TTGAGCAGTT CAGGGAGGCT
GGAGTGGACA TGTTTTCATT GGCAAACAAT CATACCAATG ATTTTGGTTC TGAAGGGCGC
GATAATACCT GCAAGGTTCT CAGAGAGAGG GGTTTTTATT TCGCAGGGTT AGAAAAATGT
CCATGGGACA CGGTTACGGT AAAGGGGGTC AGAATCGGTT TGACTGCCTT TGCTCCGACG
AGGGGCTGCC TGCAGATTAA CGACTATAAT CTCGTGCGGC AGATTGTTAC GAAACTGAAA
AAAATGTGTG ACGTTGTCAT TGTCTCTTTT CATGGAGGAG CAGAAGGATC CGCACACTCC
CACGTTACAA AAAACAAAGA AATTTTTTAT GGAGAGAACA GGGGAAATGT TTATGAATTT
GCCCGCATCG CCATTGATGC CGGTGCAGAT GTCGTACTGG GTCACGGGCC GCACGTGACA
CGTGCAATTG ATTGTTACAA GGGGCGATTT ATCGCCTATT CAATGGGGAA CTTTTGTACA
TATCGTCAAT TTAATCTGAA GGGTCTCAAC GGTATTGCGC CACTCTTTAA GCTACGCATT
AAACGAGATG GTACGTTTAT TGATGGCAGG GTAATCTCAA TAAAACAGCT TGATGATGGA
GGCCCTGTAA TCGATGAACA GAATCGGGCG AATGAGCAAA TCAAGGCGCT TACTGCATCA
GATTTACCTG AATTACCGGT CAATTTCGGT GAGAATGGCT TTTTCAACTT TACGAAAGCG
TCAACGTACA AGCCGCATGT ACGGTAA
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| Protein sequence | MVNICKGSFW KSLFLPIVLL SLVIPLHTAT SRVSDKQLLA APEIVNVRKK ALITGDATLT
IVAVGDIMMG STYPSSDYLP PKHKRLLQPL YTILNDADLT FANLEGPVLN SGGKVKQCSD
PAKCFAFRQP ESCLEQFREA GVDMFSLANN HTNDFGSEGR DNTCKVLRER GFYFAGLEKC
PWDTVTVKGV RIGLTAFAPT RGCLQINDYN LVRQIVTKLK KMCDVVIVSF HGGAEGSAHS
HVTKNKEIFY GENRGNVYEF ARIAIDAGAD VVLGHGPHVT RAIDCYKGRF IAYSMGNFCT
YRQFNLKGLN GIAPLFKLRI KRDGTFIDGR VISIKQLDDG GPVIDEQNRA NEQIKALTAS
DLPELPVNFG ENGFFNFTKA STYKPHVR
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