Gene Ppha_2434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2434 
Symbol 
ID6461233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2519655 
End bp2520728 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content55% 
IMG OID642728617 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_002019239 
Protein GI194337445 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1441] O-succinylbenzoate synthase 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCAT CACATCTCGT CATCTACCGC TATGCCATCC CTTTTACGGA ACCAATCACC 
GTAAAGGGGC ATAGGCTTGT GCAACGGGAA GGAATTGCGG TTGCACTGAA AAGCGAAGAA
GGGGGCCACA CCGCCTGGGG GGAGATTGCG CCGCTTCCTG GCCTGCACCG TGAAACGCTG
CAATCAGCCG AAGCACAACT GGTCGGGGTT CTTTCAAGAC ACGATTTTGC TGCACCAGGC
ATTTTGCCTG AAGAGCTCTT CCCTTCCGTA CGGACAGGGC TGGAGATGGT CATGATCAAC
CTTGAGGCCC TCACATCAGG AGTGCCTCCC CTGTTGTCGC TGAATGGTCA TGTCGCCGCG
CAGGTTCCAC TCAATGCCCT GCTCTTCGGC GATACGGAGC TGATCATGCA GCGGGCAGAA
AAGTACTTCG CCCTTGGATA CCGAACCTTC AAGCTCAAGG TTACAGCGGG TGATACGGCA
AACGCCATCA GAAGCATCAA TGCCCTGCAC CGCGCCTACG GAGAGCGTAT CACGTTGCGA
CTTGATGCCA ATCAGACACT CACCCTCGAT GAAGCGCTCG AGTTTGCACG ACATCTCCCG
CGAAACAGCA TTGCCTATAT CGAAGAGCCG CTGAAAGAGG CTGAACTTAT CGGCGAGTTC
TTCGCTAAAA CAGCCATTCA GACCGCGCTC GATGAAACCC TCTGGCAAAA GCCGGATCTG
CTTTTTCAAA TTCCGGAGGC ATCACTTGCC GCGCTGATAC TGAAGCCAAA CCGCCTGGGC
GGCATCAGTG CCACGCGACA ACTTGCCCGC TACGCCCGAA AACATAATCT GCTTGCTGTT
TTCAGCTCAG CCTTCGAAAG CGGCATCAGT CTGAGCTTTT ACACCTTGCT TGCGGCATCA
ACTGCCGTAA AACCGGCAGC ATGTGGCCTC GACACCTTCC GTTACCTTGA GCATGACCTG
CTTGAAGCCC CTTTTGGCGC TGAAAATGCC CTGCTTGATC CCCGAAAACT CTACCGGGAG
GGGGCGAACG TCCGGGAGAG AAGCCTCAAG CGAGTTTCAC TATGGACATT ATAA
 
Protein sequence
MKASHLVIYR YAIPFTEPIT VKGHRLVQRE GIAVALKSEE GGHTAWGEIA PLPGLHRETL 
QSAEAQLVGV LSRHDFAAPG ILPEELFPSV RTGLEMVMIN LEALTSGVPP LLSLNGHVAA
QVPLNALLFG DTELIMQRAE KYFALGYRTF KLKVTAGDTA NAIRSINALH RAYGERITLR
LDANQTLTLD EALEFARHLP RNSIAYIEEP LKEAELIGEF FAKTAIQTAL DETLWQKPDL
LFQIPEASLA ALILKPNRLG GISATRQLAR YARKHNLLAV FSSAFESGIS LSFYTLLAAS
TAVKPAACGL DTFRYLEHDL LEAPFGAENA LLDPRKLYRE GANVRERSLK RVSLWTL