| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2418 |
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| Symbol | |
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| ID | 6461071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2500906 |
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| End bp | 2501919 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728601 |
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| Product | OmpA/MotB domain protein |
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| Protein accession | YP_002019223 |
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| Protein GI | 194337429 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.609181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCAC CCAGGCTCAT TTTGTTTTTT TTATTCATGA TAGCTTTTCT GTCGTGCAAA
GATGCTGTCG CCGCTGATCT TGCCGGTTCC AAAGATCATC CCTTGTTGCG CCGCTTTGCT
GGCTCGGAAA TTGTGGGGTA CCAGGCAAAG CGTTTTGATG AGTATGAGCT GCAGACCTCA
ACCTTCAGCC GTTATAGCTT TGAGAGTAAA AAACGGGAGT ATGTTACCCT GCCCCTGAAA
CCGGAAGGGC GTTTGACGCG GATCTGGTAT GAAGCGGCTG GTGATACCGG CTCTCTTGAA
GTTTTCAGGA ACTACCTCAA TGAGCTGACA GCAAGAGGGT TTGTTATCCT CTACGACTCA
AAGAAAGATC CTGCAGCCGT TCGCTGGACC AATTATCTTG CCCCCTTTGG CTCTATGGAT
ATTCAGACCA ATCGCAGCAA CTATATCTTT TTTGCGGCCG AAAAGGCGGG TATCTGTGTC
GCCAGCGCTA AAAAGAAGCG TCCGGAAGGA GATGTCTATG TTCATTTGAC TGCTGTGGAG
TGGGGGAAGA GTGATGCGGT GTATAAGGCA AAACGCGGCG CCTACCTTGC TGTCGATATT
ATTGAAACTC AGCCCATGGT GCAGAAAATG GTGACGGTCA CTGCTGCTGA AATGTCGCAG
TCATTGAGCG CTGTTGGCAA GGTTGCTCTC TATGGCATCT ATTTTGACCC CAATAAATGG
GATATCAAAC CTGAGTCTCG TCCTGCGCTG AAGGAAATTG CGATACTTCT GAACAAACAG
CCGACATTGA GACTGCATGT TGTGGGGCAT ACCGATAATG TTGGCGGGTA TGAGGCTAAT
ACCGTGCTCT CCAAGCGCAG GGCTGAAGCC GTTGCCGCCT CTCTTGTCAA GGATTTTGGT
ATTTCAGCGC TTCGCCTTAC GGCAAATGGG GCGGCCTATC TTGCTCCTGT TGCGTCGAAT
AGCACGGAGG CAGGAAGGGC TAAAAATCGC CGTGTTGAAC TGGTGCCGAG ATAG
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| Protein sequence | MKSPRLILFF LFMIAFLSCK DAVAADLAGS KDHPLLRRFA GSEIVGYQAK RFDEYELQTS
TFSRYSFESK KREYVTLPLK PEGRLTRIWY EAAGDTGSLE VFRNYLNELT ARGFVILYDS
KKDPAAVRWT NYLAPFGSMD IQTNRSNYIF FAAEKAGICV ASAKKKRPEG DVYVHLTAVE
WGKSDAVYKA KRGAYLAVDI IETQPMVQKM VTVTAAEMSQ SLSAVGKVAL YGIYFDPNKW
DIKPESRPAL KEIAILLNKQ PTLRLHVVGH TDNVGGYEAN TVLSKRRAEA VAASLVKDFG
ISALRLTANG AAYLAPVASN STEAGRAKNR RVELVPR
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