| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2405 |
|---|
| Symbol | |
|---|
| ID | 6460952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2489660 |
|---|
| End bp | 2490103 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642728588 |
|---|
| Product | transposase IS200-family protein |
|---|
| Protein accession | YP_002019211 |
|---|
| Protein GI | 194337417 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.585077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGAAT ATATTCACAA GAGCCATAAT GTCACCGTTC TGATGTATCA CATAGTGCTG
CCAGCAAAGT ATAGACGCGT GATTTTTGAT GATGAGGTGG ATGAAGTCCT GAAAGATGTG
TGTTTAGAGA TAGAGAATCG TTATCAGATC AAGTTCTTGG AAATTGGTAC AGATAAAGAT
CATGTGCATT TTTTTTTGCA ATCAGTGCCA ACGTACATCG TCACGAAAGT CGTGACGATG
ATAAAGAGTA TTTCTGCTCG AGAAGTGTTC AGGCGCTGTC CCAAAGTAAA AAAACTGTTG
TGGGGTGGCG AGATGTGGAC GGATGGGTAT TATGCTGGAA CGGTAGGAAA GCATGGAAAT
GAAGACATGA TAGGCAAGTA TGTCAAAGGG CAGGGCGGTA CGTATCAGAA GCGCTACAGT
GATTATCAGT TGTCAATGTT TTAG
|
|---|
| Protein sequence | MSEYIHKSHN VTVLMYHIVL PAKYRRVIFD DEVDEVLKDV CLEIENRYQI KFLEIGTDKD
HVHFFLQSVP TYIVTKVVTM IKSISAREVF RRCPKVKKLL WGGEMWTDGY YAGTVGKHGN
EDMIGKYVKG QGGTYQKRYS DYQLSMF
|
|---|
| |