| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2397 |
|---|
| Symbol | |
|---|
| ID | 6460910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2481659 |
|---|
| End bp | 2482591 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642728580 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_002019203 |
|---|
| Protein GI | 194337409 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACA ACAGTTCCCG CTACCTTTTT ATTTTTAATC CTGCGGCAGA TAAAGGCCGG
GCTTCACGCA AGGCGGAGTG GCTGAAGGCG CTTGTTGCCG ACAGGAATGA TTCCATAATG
GCCACTACGG ACTATGCCGG ACATGCCGGA GAGATTGCCC GTTCCGGGAT CAGGGAGAGC
AGTTGTCTTA TTGCTTGTGG CGGGGATGGT ACCCTTCATG AAGTGGTCAA TGCCGTTGCG
GGAGAGGAAC GTACGGTCGG AATTTTGCCG ATCGGCTCGG CAAATGATTT TATCAAGACG
CTTAATCCCC GAAAGGAACA TCACAAGGGT ATCGCTCATC TTTTCGAAGG GACGAGTAAA
AAGGTTGATC TCGGGAGTGT CTCATTCGGT GTTGCCAATC ACCGCTATTT TGTCAACTCT
CTTGGTATTG GTTTTACCGG AAGAGTTGCA AAGGCTGTTA AGCGTCTCCC CTGGTTGAAA
GGAGAACTTG GCTACGTGTA TGCGCTTTTC AGTGTGCTTG CCGGTTATTC CTCCCTGAAT
ATGCATATCA CCATTACCCT CGAAGATTCG GTGCTGGAGC TTCATGAGCC GGTGTTCGCC
TTTACGGTTT CAAACGGAAA GATCGAAGGG GGAAAATTCA TCATTTCGCC CCATGCCGAG
TTGTCGGATG GTTTGCTTGA TATCTGTATT CTCAAAGATA TTCGGAGGTA CGAATTTTTT
CGTTTTGTAC TCAAATACCT TAATGGAACC CATATCAACG ATCCGAAAAT TCTCTACTGC
AAGGCGAAGG CTGTAACCCT GACGTTGATG GCGCCAGAGG TGATGCATAT GGATGGAGAG
GTCTATGATA ACATTCTCGG CAAGGTCGGT ATTTCGGTTC TTCCCGACGG TATTCGTCTC
CTTTGCGATC TGCTGCCCGA AGCTGAACCA TAA
|
|---|
| Protein sequence | MMNNSSRYLF IFNPAADKGR ASRKAEWLKA LVADRNDSIM ATTDYAGHAG EIARSGIRES
SCLIACGGDG TLHEVVNAVA GEERTVGILP IGSANDFIKT LNPRKEHHKG IAHLFEGTSK
KVDLGSVSFG VANHRYFVNS LGIGFTGRVA KAVKRLPWLK GELGYVYALF SVLAGYSSLN
MHITITLEDS VLELHEPVFA FTVSNGKIEG GKFIISPHAE LSDGLLDICI LKDIRRYEFF
RFVLKYLNGT HINDPKILYC KAKAVTLTLM APEVMHMDGE VYDNILGKVG ISVLPDGIRL
LCDLLPEAEP
|
|---|
| |