Gene Ppha_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2370 
Symbol 
ID6462573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2456125 
End bp2456949 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content58% 
IMG OID642728556 
Productprotein of unknown function DUF62 
Protein accessionYP_002019179 
Protein GI194337385 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCG GACACCCCCC TGTCATCGTC CTGATGACCG ATTTCGGCCT CGCCGACACC 
TATATCGGCC AAATGAAAGG TGTCATCCTC TCCCTTGCGC CATCAGCACA GATTATCGAC
CTCACCCACG CCATAAGCGC CCAGAACATT GCGCAAGGCG CCTTCCAGCT CGGCAAGTCA
GCCCCCTTTT TCCCTGAAGG AGCAATCTTT GTCGCAGTCG TCGATCCGGG AGTCGGCACC
TCACGCAAGG CAATTGCCGT ACAATGCGGA AAACAGAGCT TTCTTGCCCC CGACAACGGC
CTGCTCACCG CCCTCTTCCA GACCGGGAAG GTCACTCAAT GTGTCACCAT CACCAATGAA
CGCTATATGC TTCCTTCCCG CAGCTCAACC TTTCATGGGC GCGACATATT TTCACCAGCA
GCCGCACATC TCGCCTCCGG CGTTGCGCTC CGGGAGCTTG GCTCAAAGAT GGAGCTGGCG
GAATGCACCA AAATCCCGTT ACCGGGATGC GAAAGCGGAG ACAACGGCGC ATCATGGGAG
GGAACAATCA TCTGCACCGA CCACTTCGGC AACCTCATAA CCTCACTCGA CGCGGAAGTG
CTTGACCGCT CAAAAGAGTG GCTGATAGGC GCCGGAAACC ATCAACTGCC CATCTGCCGC
ACCTATGGAG AAGTTGCCGA CCAGCAGCCA CTCGCCTATA CCGGAAGCAG CGGCATGATC
GAAATCGCCA TCAGAAACGG CAACGCAGCA GAGAGACTCG GGCTGAGGGA TGGAGATGCG
GTGAGGGCTT CCGCAGCATC CTCCATGCCA TTCTCTCCTC GGTGA
 
Protein sequence
MQTGHPPVIV LMTDFGLADT YIGQMKGVIL SLAPSAQIID LTHAISAQNI AQGAFQLGKS 
APFFPEGAIF VAVVDPGVGT SRKAIAVQCG KQSFLAPDNG LLTALFQTGK VTQCVTITNE
RYMLPSRSST FHGRDIFSPA AAHLASGVAL RELGSKMELA ECTKIPLPGC ESGDNGASWE
GTIICTDHFG NLITSLDAEV LDRSKEWLIG AGNHQLPICR TYGEVADQQP LAYTGSSGMI
EIAIRNGNAA ERLGLRDGDA VRASAASSMP FSPR