| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2366 |
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| Symbol | |
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| ID | 6462126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2449729 |
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| End bp | 2451825 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728552 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_002019175 |
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| Protein GI | 194337381 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGAG TGAAAATAAT TATCAAGTTT GGAGAGTTGT TTATGGAGGT GAACGGAAGC
GGAATATATA AAATTGTCAG TCCTTACAGT CCTGCCGGCG ATCAGCCGAA AGCCATCGAG
GCGCTTTGCG ACGGTGTAAG GTCGGGGAAC CCCTACCAGA CGTTGCTTGG TGTCACTGGC
TCGGGCAAGA CCTTTACCAT TTCGAACGTT ATTGCCCGTT TCGACAGGCC GGTTCTGGTG
ATGAGCCATA ACAAGACGCT TGCTGCCCAG TTGTATGGGG AACTCAAACA GTTTTTCCCC
GACAATGCGG TCGAGTATTT TATCAGTTAT TACGATTTTT ATCAGCCTGA AGCCTATCTC
CCCTCTCTCG ACAAGTATAT CGCCAAAGAT CTGCGTATCA ACGACGAAAT TGAACGGCTT
CGGCTCAAGG CGACCAGCTC CCTGCTCAGT GGCAGGAAGG ATGTGATTGT GGTGAGTTCT
GTCAGTTGTA TTTATGGTCT GGGCTCTCCT GAAGACTGGA AAGCGCAGAT TGTGGAACTG
CGTTCCGGAA TGGAGAAGGA TCGGGATCTT TTTTTGAAGG AGCTGATTTC TCTCCATTAC
ATTCGTGATG ATGTGCAGCC GAGTTCGGGG AAGTTTCGTG TGAGGGGGGA TATTATCGAT
CTTGTCCCTG CACATGAGGA GCTTGCTCTG CGCATCGAGT TTTTTGGCTC CGAGATTGAA
AGTATTCAGA CCTTTGATAT TCATAGCGGA GAGGTGCTTG GGGTTGAGGA TTATGCCTTC
ATCTATCCGG CCCGCCAGTT TGTTGCTGAC GAGGAGAAGC TTAAGGTTGC CATGCTCGCT
ATTGAAAATG AGCTTGCCGA GAGGCTGAAC TATTTTCGTT CTGAAAATCG TCTTCTTGAG
GCTCGCAGGA TTGAAGAACG TACCCGTTAT GACCTTGAGA TGATGAAGGA GCTTGGCTAC
TGTTCCGGTA TTGAAAATTA TTCAAGGCAT CTTTCGGCTC GCCCTCCCGG TGAGCGCCCC
TGTTGTCTGC TTGACTATTT TCCTTCGGAC TTTCTGGTCA TCATTGATGA ATCCCATGTG
ACGCTGCCGC AGATACGGGG GATGTATGGG GGAGACCGTT CCCGTAAAAC CATTTTGGTT
GAGCATGGTT TCCGGTTGCC TTCCGCTCTC GATAATCGTC CGCTGCGTTT CGAGGAGTTT
GAGGAGATGG CGTCGCAGGT TATCTGTGTC AGCGCTACTC CGAGTGAACA TGAACTGCTG
CGCTCGGGTG GTGTGGTGGT GGAGCAGCTT GTCCGTCCTA CCGGTCTGCT TGATCCTCCG
GTGGAGGTTC GTCCTGTTAC AGGCCAGATC GACAACCTTC TGGCCGAAAT CCGTATTCAT
ACCGCCAAGG GCAATAAGGT TCTGGTCATG ACGCTGACCA AAAGAATGTC GGAAGATCTG
CATGACTTTT TCAGAAAGAC AGGTATTCGT TCGCGTTATC TGCATTCGGA GATCAAGAGT
CTGGAGCGGA TGCAGATTCT TCGTGAGCTC AGGGTAGGGG ACATTGACGT GCTTGTCGGG
GTCAACCTTC TTCGTGAAGG GCTTGATCTT CCGGAAGTTT CTCTTGTTGC GATTCTTGAT
GCCGACAAGG AGGGCTTTTT GCGCAATACC CGTTCGCTTA TGCAGATCGC AGGCAGGGCC
GCCCGCAACG TTGATGGTCT GGTTGTGCTC TATGCCGATG TGGTAACCCG TTCCATTCGT
GAAGTGCTTG ATGAAACTGC CCGGCGTCGT ACCATCCAGC AACGCTACAA CGAAGAGCAC
GGCATTACTC CCCGTTCAAT CATCAAATCG GTTGACCAGA TTCTCGACAC CACCGGTGTG
GCTGATGCCG AGGAGCGTTA CCGGAGAAAG CGCTTCGGTC TTGAGCCGAA ACCTGAGAGG
GTGCTTTCCG GTCATATTGA TACACTGACT CCTGAAGCGG GTTATGCCCT CGCAGCGGAA
CTCCGCCTTG AAATGCAGGA AGCTGCTGTT CAGATGGAGT ATGAAAAGGC AGCTTATCTG
CGTGATGAAA TCACAAAGCT GGAACAGGCT CTGGAGCGAT TACCGGCAGG AGAATAA
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| Protein sequence | MEGVKIIIKF GELFMEVNGS GIYKIVSPYS PAGDQPKAIE ALCDGVRSGN PYQTLLGVTG
SGKTFTISNV IARFDRPVLV MSHNKTLAAQ LYGELKQFFP DNAVEYFISY YDFYQPEAYL
PSLDKYIAKD LRINDEIERL RLKATSSLLS GRKDVIVVSS VSCIYGLGSP EDWKAQIVEL
RSGMEKDRDL FLKELISLHY IRDDVQPSSG KFRVRGDIID LVPAHEELAL RIEFFGSEIE
SIQTFDIHSG EVLGVEDYAF IYPARQFVAD EEKLKVAMLA IENELAERLN YFRSENRLLE
ARRIEERTRY DLEMMKELGY CSGIENYSRH LSARPPGERP CCLLDYFPSD FLVIIDESHV
TLPQIRGMYG GDRSRKTILV EHGFRLPSAL DNRPLRFEEF EEMASQVICV SATPSEHELL
RSGGVVVEQL VRPTGLLDPP VEVRPVTGQI DNLLAEIRIH TAKGNKVLVM TLTKRMSEDL
HDFFRKTGIR SRYLHSEIKS LERMQILREL RVGDIDVLVG VNLLREGLDL PEVSLVAILD
ADKEGFLRNT RSLMQIAGRA ARNVDGLVVL YADVVTRSIR EVLDETARRR TIQQRYNEEH
GITPRSIIKS VDQILDTTGV ADAEERYRRK RFGLEPKPER VLSGHIDTLT PEAGYALAAE
LRLEMQEAAV QMEYEKAAYL RDEITKLEQA LERLPAGE
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