Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2362 |
Symbol | |
ID | 6461312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2445217 |
End bp | 2445861 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642728549 |
Product | protein of unknown function DUF477 |
Protein accession | YP_002019172 |
Protein GI | 194337378 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0549587 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATC CGGCAGAAAA ATTTCTTGCA GCGGCAGAAC GGCTTCAGAT TGAGGCGCGA ATAGCGGAAG CTGAAATGCG CACCTCAGGT GAAATTGTGG TTATGGTCGT TCCGTCAAGT TATCACTATC CTCTTGCAAG CATGATCGGC AGTTCGCTTC TGGCGATACT CCTTGGTGTT GCCGTGGCCT TTTTTACCGG GCACGAGAGT ATGTGGTTTT TTCTTGAACT CTTTGGCCTT TCGTTTATCG TGCTTCACGA ACTGCTCAAA CGAATTCCTC TTCTCAAACG TCTCTTTGTC ACGGCATCGG ATATGAAGGA GGAGGTCGAA GAGGCTGCCA TCAACGCCTT TTATCAGAAG GATATTAACC AGACCGTTGA TCATACCGGC ATTCTCATCT ATATTTCACT GTTTGAGCAT CATGTTCGTG TGATTGCCGA TAAAGGCATT AATGCCAAAG TTGACAAGGC GGTCTGGCAG GAGATTGTCG ATACCATTGT TGGAGGGATC AAAAGCAAGG CCCAGGCCGC AGCAATAGCG GGAGCCGTTG ACCGGTGCGC TGCAATTCTT GCCGCCCATT TTCCCCTGAA AGCCGGAGAT CGTAATGAGC TTGGCAATGA GGTGATTATT GGCCGGGGTA AGTGA
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Protein sequence | MKDPAEKFLA AAERLQIEAR IAEAEMRTSG EIVVMVVPSS YHYPLASMIG SSLLAILLGV AVAFFTGHES MWFFLELFGL SFIVLHELLK RIPLLKRLFV TASDMKEEVE EAAINAFYQK DINQTVDHTG ILIYISLFEH HVRVIADKGI NAKVDKAVWQ EIVDTIVGGI KSKAQAAAIA GAVDRCAAIL AAHFPLKAGD RNELGNEVII GRGK
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