| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2355 |
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| Symbol | rplM |
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| ID | 6461273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2437721 |
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| End bp | 2438170 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728542 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_002019165 |
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| Protein GI | 194337371 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.310176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAGA CGTTAAGTTT TAAAACATAT TCGGCAAAGC CTGCAGAGGT CGACAGGAAG
TGGTACGTTG TTGATGCCGA GGGTCAGGTA TTGGGCAGAA TGGCTTCTGA AATTGCAAAG
GTCCTCAGGG GCAAGCATAA GCCACAGTTT ACGCCGCATA TCGATACCGG TGATTTCATT
GTGGTAACCA ATGCCGAAAA AGTTGCCCTA ACCGGCAAAA AAGAGGAGCA GAAGAGCTAC
TTCTCGCATT CCCAGTATCC GGGTGGTGTC AAGATTGACC ATGTCAAGGA CCTTCTGAAA
AAAAGACCTG AAAGGATTAT TGAAAATGCT GTGTGGGGAA TGTTGCCGCA CAACAATCTC
GGCCGTCAGT TGTTCAGAAA ACTCAAGGTT TATGCCGGTT CCGAGCACCC GCATGCTTCG
CAGGCTCCTG TTGAAATGAA GGTAAACTAA
|
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| Protein sequence | MSKTLSFKTY SAKPAEVDRK WYVVDAEGQV LGRMASEIAK VLRGKHKPQF TPHIDTGDFI
VVTNAEKVAL TGKKEEQKSY FSHSQYPGGV KIDHVKDLLK KRPERIIENA VWGMLPHNNL
GRQLFRKLKV YAGSEHPHAS QAPVEMKVN
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