| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2353 |
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| Symbol | rpsB |
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| ID | 6462084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2436387 |
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| End bp | 2437154 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728540 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_002019163 |
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| Protein GI | 194337369 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00564969 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCACATT TTCAGCTTGA AGAGATGCTC CGCGCAGGAG TCCATTTCGG TCACCTTGCA
CGTCGCTGGT GCCCAAAAAT GAAGCCGTAC ATTTTCATGG AAAAAAACGG CGTTCATATT
ATCGATCTGC AGAAAACCGT CGTTCTTGCC GATGAGGCAC TGAAGGCGCT TGAAGCAATT
GCACAGACAG GCAGGGAGAT CATGTTTGTC GGTACCAAAA AACAGGCCAA ACACATTATT
GCCGAACAGG CAGAGCGTGC AGGGATGCCT TACGTTTGCG AGCGTTGGCT GGGTGGTATG
CTTACCAACT TCCAGACCAT TCGGCAGAGT ATCCGGCGCA TGAACTCCAT CGACCGGATG
GCGACGGATG GAACGTATGA TATGATTACC AAGAAAGAAC GCCTGATGCT GGGCCGTGAA
AAAGAGAAGC TCATGAGGAT TCTCGGTGGT ATTGCCACCA TGACAAGGCT TCCAGCCGCG
CTCTTCATCG TTGACATCAA GAAAGAGCAT ATTGCCATCA AGGAAGCCCG CTCACTCGGT
ATTCCCATCA TTGCCATGGT CGATACCAAC TGCGATCCTG AACTGGTTGA TTTCGTCATT
CCAGCCAATG ACGATGCAAT CCGCTCCATT CAGTTGATGG TCAAGGCTGT TGCCGATACC
GTCATCAACG CACGGGCGCT GAAAGTGGAA AATGAAGTGC TTGCCGGTAT GGATGAAGAG
GAAGAGGATG GCGATATCGA CGTCGAAAAG GAAGAGATCA GCGAATAA
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| Protein sequence | MSHFQLEEML RAGVHFGHLA RRWCPKMKPY IFMEKNGVHI IDLQKTVVLA DEALKALEAI
AQTGREIMFV GTKKQAKHII AEQAERAGMP YVCERWLGGM LTNFQTIRQS IRRMNSIDRM
ATDGTYDMIT KKERLMLGRE KEKLMRILGG IATMTRLPAA LFIVDIKKEH IAIKEARSLG
IPIIAMVDTN CDPELVDFVI PANDDAIRSI QLMVKAVADT VINARALKVE NEVLAGMDEE
EEDGDIDVEK EEISE
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