Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2352 |
Symbol | tsf |
ID | 6462447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2435487 |
End bp | 2436353 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728539 |
Product | elongation factor Ts |
Protein accession | YP_002019162 |
Protein GI | 194337368 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0264] Translation elongation factor Ts |
TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000872397 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGA TTTCAGCAAA AGATGTAAAA AATCTTCGTG ATATAACAGG TGCAGGCATG ATGGACTGCA AAAAAGCCCT TGATGAAACT GGAGGGGATA TGCAGCAGGC TATCGATTAT CTGCGCAAGA AAGGCGCTGC ACTTGCTGCG AAGCGTGCAG ACAGGGATGC CAGAGAGGGT ATGGTCGAAA TTAAAATGAC CGCCGACCAT AAGGCCGGTA TTATTCTTGA ACTGAACTGT GAGACCGACT TTGTTGCCCG CGGTGAGGAC TTTACCAATT TTACGGTTGC CCTTGGTGAG CTTGCCCTTG CAAAGTGCAT CTCATCACCT GAAGCCTTAA TGACGCTGAC ACTTGGCGAA GCGTATGGCG GCGAAACGGT TGATGATGCC ATCAAAACCA TGACCGGCAA GCTTGGCGAA AAGATCAGCC TCAAACGTCT GGTCTATATT GACGCAGGTG ACGGTGTGGT CGAATCCTAT GTTCATCCCG GTGCACAGCT TGGCGCAATC ATTCATCTTG CTACCGATCA GCCCGATGCT GTTCGCGAAC TGGCCAGGGA TCTTGCCATG CAGGTCGCCG CAGCAGCTCC GATTGTTGTT GACCGCTCCT TTGTTCCAGC CGATTACATC GCAAAAGAGG CGGAAATTTA TCGTCAGCAG GCTCTCGAAC AGGGAAAGAA AGAGGCGTTT GTCGACAAGA TTGTTCTTGG CAGACTTGAA AAGTATTATC AGGACGTTGT GCTCAGCGAG CAGTTCTTCA TCAAGGACAG CACCGTCAAG GTATCTGACG TGCTCAATGA GTTCCGAAAA AAGCATCAAG TAAAGGTTGA TGTGATCGGA TTTGTCCGCT GCAAGTTGGG AGAGTAA
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Protein sequence | MSQISAKDVK NLRDITGAGM MDCKKALDET GGDMQQAIDY LRKKGAALAA KRADRDAREG MVEIKMTADH KAGIILELNC ETDFVARGED FTNFTVALGE LALAKCISSP EALMTLTLGE AYGGETVDDA IKTMTGKLGE KISLKRLVYI DAGDGVVESY VHPGAQLGAI IHLATDQPDA VRELARDLAM QVAAAAPIVV DRSFVPADYI AKEAEIYRQQ ALEQGKKEAF VDKIVLGRLE KYYQDVVLSE QFFIKDSTVK VSDVLNEFRK KHQVKVDVIG FVRCKLGE
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