Gene Ppha_2352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2352 
Symboltsf 
ID6462447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2435487 
End bp2436353 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content50% 
IMG OID642728539 
Productelongation factor Ts 
Protein accessionYP_002019162 
Protein GI194337368 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000872397 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA TTTCAGCAAA AGATGTAAAA AATCTTCGTG ATATAACAGG TGCAGGCATG 
ATGGACTGCA AAAAAGCCCT TGATGAAACT GGAGGGGATA TGCAGCAGGC TATCGATTAT
CTGCGCAAGA AAGGCGCTGC ACTTGCTGCG AAGCGTGCAG ACAGGGATGC CAGAGAGGGT
ATGGTCGAAA TTAAAATGAC CGCCGACCAT AAGGCCGGTA TTATTCTTGA ACTGAACTGT
GAGACCGACT TTGTTGCCCG CGGTGAGGAC TTTACCAATT TTACGGTTGC CCTTGGTGAG
CTTGCCCTTG CAAAGTGCAT CTCATCACCT GAAGCCTTAA TGACGCTGAC ACTTGGCGAA
GCGTATGGCG GCGAAACGGT TGATGATGCC ATCAAAACCA TGACCGGCAA GCTTGGCGAA
AAGATCAGCC TCAAACGTCT GGTCTATATT GACGCAGGTG ACGGTGTGGT CGAATCCTAT
GTTCATCCCG GTGCACAGCT TGGCGCAATC ATTCATCTTG CTACCGATCA GCCCGATGCT
GTTCGCGAAC TGGCCAGGGA TCTTGCCATG CAGGTCGCCG CAGCAGCTCC GATTGTTGTT
GACCGCTCCT TTGTTCCAGC CGATTACATC GCAAAAGAGG CGGAAATTTA TCGTCAGCAG
GCTCTCGAAC AGGGAAAGAA AGAGGCGTTT GTCGACAAGA TTGTTCTTGG CAGACTTGAA
AAGTATTATC AGGACGTTGT GCTCAGCGAG CAGTTCTTCA TCAAGGACAG CACCGTCAAG
GTATCTGACG TGCTCAATGA GTTCCGAAAA AAGCATCAAG TAAAGGTTGA TGTGATCGGA
TTTGTCCGCT GCAAGTTGGG AGAGTAA
 
Protein sequence
MSQISAKDVK NLRDITGAGM MDCKKALDET GGDMQQAIDY LRKKGAALAA KRADRDAREG 
MVEIKMTADH KAGIILELNC ETDFVARGED FTNFTVALGE LALAKCISSP EALMTLTLGE
AYGGETVDDA IKTMTGKLGE KISLKRLVYI DAGDGVVESY VHPGAQLGAI IHLATDQPDA
VRELARDLAM QVAAAAPIVV DRSFVPADYI AKEAEIYRQQ ALEQGKKEAF VDKIVLGRLE
KYYQDVVLSE QFFIKDSTVK VSDVLNEFRK KHQVKVDVIG FVRCKLGE