Gene Ppha_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2339 
Symbol 
ID6462425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2414473 
End bp2416800 
Gene Length2328 bp 
Protein Length775 aa 
Translation table11 
GC content48% 
IMG OID642728528 
Productprotein of unknown function DUF323 
Protein accessionYP_002019151 
Protein GI194337357 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCTTA CCTGGCTGCA TGTTTCGGAT TTCCATCTGA GCAATGGTGC TCCTTATGAT 
CAGGTGGTTA TACTTCGTGC TCTTGTTGAA TCGGTCAGGC GATTCCGTGA AGAAGGGCAT
GTTCCTGACC TGATTTTTGC AACTGGTGAT ATTGCGCAAA ACGGAAAGGC CAACGAGTAT
GATGCTGCCA CGAAATTTTT CGATGATCTG CTCGAAGCCG CCGCTCTCAA TCGCGATCGC
CTTTTCATCA TTCCCGGCAA CCATGATGTT GACCGCAAAA TGGGGAAATG GAGTCACCGC
CATCTTGATA ATGCTGAAGA AGCCGACGAG TACTTTGATC CTGAATCGAC TTTTCCACAA
TTGAGAGATA AGTTTCAAGC ATTCTCGTCA TGGTATAACG ACTATTTCAA AGCCATCCGC
TCGTTCCCGA CAAACACAAC ATGCAGTCCG GTAGAACTCG TAACGATCAA CGGACTCCGT
CTTGCCGTTC TGCCCCTGAA CAGTGCGCTC TTCTGTATTG ACGATCATGA TCATGAGAAG
CTCTTCATTG GTTGCCGATG TCTTGATGCG GCAAGGAAGC AGTTTGAAGC AGCCGATCTC
AAAGTTGCCT TGATTCATCA TCCTCTCGAC TGGTTAAGCC CTTTTGAGCA ATCAAACATT
GAGGCTGTTC TTGAAGAGTC GGTTGATCTC CTGCTTCAAG GGCATTTCCA TCAGGTTGCG
GTTAAAGGTA TTGTGTCAGC CAATGGTGGT TACTTGAAGC TTGCTGCAGG GGCCTCATAT
CAGACCCGAC AGTGGCCAAA CACAGCAATG TATGTCACCT TCGAAAACAG CGGGGTAACG
ATTTTTCCGA TACGCTATGA GGACAAACCC GGTGAGAAAT GGACGCTCGA TACCAGTCTC
TATCCTTCTC CATCATATAC AGGGAGCTTT GTGCTTCCTC GCCGCCTTGG CACGGGTTAT
GATAAAGATC TCTTATCAAA ATTGAGTGCA CCAAAAGCTT TTATAGCTTA TTCCTGGGAA
GACGATAATC ATAAAAAATG GGTTGCCGAT CTTGCAACTC GCCTTCGTCA CAGTGGTGTT
GAAACTATTC TTGATCAATG GCATGCCGTG CCGGGAGATC AGCTTCCGGA TTTTATGGAA
AAGGAGATCC GCAATAATGA TTATGTGCTG ATTATTTGCA CCCCAAAGTA TCGTAGTAAA
TGCGATAAAC GTGATGGTGG CGCCGGGTAT GAGGGCGACA TTATGACTGC CGAGGTTTTT
ACAACAAAAA ATCATAGAAA ATTTATTCCA GTACTTGCGA AAGGGAGCTG GGATGAAAGC
GCTCCATCAT GGTTGAAAGG TAAATTTTAT GTTGATTTAA GCACCCCGGT AGAAGATGAA
CGCGACTATC CTCGTTTGCT TGCTGCACTC CTTAATTCAC ATCCCCAACC ACCGCCCGTA
ATGCAACGTA TGCCTGAGAT TCCTTTCAGG CTACTTTCGA CAACGCTACC GATTGTGAAG
GTTGAAAATC GCCAGCAATT GTTTCGAAAT ACGAATGAAC AGAATGCAGA GTATATCCTG
ATCCCGGGTG GGAGTTACCT TTATTCCGCA ACAGAGAAGG AGGAACAAGT GTCTGATATT
TATTTTGCCA AGTATCCCGT GACCAACCAA CGTTATCGTG ATTTTATACA ATTTTTGCAG
TCAGATGGTT CGTCTCAAGG CGTTTCTGTA TCGGTCTCAT CTATCAGGGA AGAGCTTAAG
GCAATTGCAA AACGAAACCT CTGGTGGCCA CAGTTGGGAG ATTATCTTTA TGAGGGTAAA
AACGACCTTG CCGCTTTGTT TCGATCAAGT TTCGATGGGG AAGCAAAATT TAAGGGTAAT
AATCAACCCG TGGTTGGTGT AACTTGGTAT GCTGCCCGTG CATACTGTCT GTGGCTTTCA
ATGCTTGAAG GGAGTACTAT GCGTTATAGG CTCCCAACGG AAATTGAGTG GGAGTGGGCT
GCAGGAGGAA TACGGCAAAC GACTCCGCAG AAAGTTCGAG ATTATCCCTG GCCGGAAGAA
GAAGGAGATA TCTCTGTTCG ATTGGCCAAT TACAATAGTA CTGTTGGGGC AACAACACCG
GTTGGCAGTT ACCCCGATGG AGCAACACCC GAAGGGCTGT ACGACATGGC TGGTAACGTA
TGGGAATGGA CGGATAGTTG GTGGGAGGAA AAAAAGCTTT CGCTCCGTGT GCTTCGTGGC
GGGTGCTGGC GCTACGATGC CGAGTACTGT CGGTCGGCGT ATCGGGGCAG CTGCGCCCCC
GGCAACCGGC GCAGCAACGT GGGCTTCCGC CCGGTTTTCG TCCCGTAG
 
Protein sequence
MALTWLHVSD FHLSNGAPYD QVVILRALVE SVRRFREEGH VPDLIFATGD IAQNGKANEY 
DAATKFFDDL LEAAALNRDR LFIIPGNHDV DRKMGKWSHR HLDNAEEADE YFDPESTFPQ
LRDKFQAFSS WYNDYFKAIR SFPTNTTCSP VELVTINGLR LAVLPLNSAL FCIDDHDHEK
LFIGCRCLDA ARKQFEAADL KVALIHHPLD WLSPFEQSNI EAVLEESVDL LLQGHFHQVA
VKGIVSANGG YLKLAAGASY QTRQWPNTAM YVTFENSGVT IFPIRYEDKP GEKWTLDTSL
YPSPSYTGSF VLPRRLGTGY DKDLLSKLSA PKAFIAYSWE DDNHKKWVAD LATRLRHSGV
ETILDQWHAV PGDQLPDFME KEIRNNDYVL IICTPKYRSK CDKRDGGAGY EGDIMTAEVF
TTKNHRKFIP VLAKGSWDES APSWLKGKFY VDLSTPVEDE RDYPRLLAAL LNSHPQPPPV
MQRMPEIPFR LLSTTLPIVK VENRQQLFRN TNEQNAEYIL IPGGSYLYSA TEKEEQVSDI
YFAKYPVTNQ RYRDFIQFLQ SDGSSQGVSV SVSSIREELK AIAKRNLWWP QLGDYLYEGK
NDLAALFRSS FDGEAKFKGN NQPVVGVTWY AARAYCLWLS MLEGSTMRYR LPTEIEWEWA
AGGIRQTTPQ KVRDYPWPEE EGDISVRLAN YNSTVGATTP VGSYPDGATP EGLYDMAGNV
WEWTDSWWEE KKLSLRVLRG GCWRYDAEYC RSAYRGSCAP GNRRSNVGFR PVFVP