| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2334 |
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| Symbol | |
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| ID | 6461708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2408806 |
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| End bp | 2410107 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728523 |
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| Product | Ribulose-bisphosphate carboxylase |
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| Protein accession | YP_002019146 |
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| Protein GI | 194337352 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0903327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTG AGGATATAAA AGGTTTCTTT GCATCAAGGG AGCAGCTCGA TATGGCTGAC
TACCTGACGC TGGATTACTA CCTGGAGTGT GTGGGAGATA TAGAGACGGC GCTTGCCCAT
TTCTGCAGTG AACAATCGAC AGCACAGTGG AAACGTGTTG ATCATGATGA AGATTTTCGT
CCAAAGTATG CCGCCAGGGT GATCAGTCTG ACGATAGAGG GGGAGCTTGA GGCTCTCAGC
TATCCGGTCG TGCATTTCGA AACAGGCCCT ATTCATGCAT GCCGCGTCAC TATTGCCCAC
CCGCATCGGA ATTTTGGCGC CAAGCTGCCG AATCTGCTCA CCGCTGTTTG TGGGGAGGGA
GTTTTTTTTA CTCCCGGTGT GCCGGTGGTG AAGCTGCTTG ATATCGGTTT TCCGGAGGCT
TATCTGAGGG CTTTTGATGG CCCCAAATTT GGTATTGATG GTATTCGTGA TCTTCTTCAG
GCCTATGACC GCCCGATTTT TTTCGGAGTA GTGAAGCCAA ATATCGGACT CAGTCCAGCC
AATTTTGCCG AGATTGCCTA TCAGAGCTGG CTTGGAGGGC TTGATATTGC CAAGGATGAC
GAAATGCTTG CCGATGTTGA CTGGTCTTCC CTGATTGAGC GATCCCGAGT ACTGGGAGAG
GCAAGAGCTC GGGCGGAAAA GGAGACCGGA GAGCCAAAAA TTTATCTTGC AAATGTTACG
GATGAGGTTG ACCGACTTCT TGAGCAGCAC GACATTGCCG TCAGCAATGG AGCGAATGCT
TTGCTGATCA ATGCTCTGCC GGTTGGACTC AGCGCTGTCA GAATGCTTGC CCGGCATACG
AAGGTGCCAC TTATTGGCCA TTTTCCCTTT ATTGCGGCTT TCAGCAGGAT GGAAAAATAT
GGTGTCCATT CAAGGGTTAT GACCAAACTT CAGCGCCTTG CCGGTCTTGA TTCGATTATT
ATGCCCGGTT TTGGCAGCAG GATGATGACC CCTGAAGAGG AGGTAAAGGA CAATATTGCC
GAGTGTCTGC AGGAGTTTGG TCATATCAGG CGTTCGCTTC CCGTTCCAGG AGGCAGTGAT
TCAGCGCTTA CGCTTGAAAC CGTCTACCGG AAAGTGGGGA GTGTCGATTT TGGTTTTGTA
CCGGGTCGGG GGATTTTTGG CCATCCTATG GGCCCCAGAG CCGGAGCCAT GAGTATCCGT
CAGGCATGGG AGGCTATTGA GCAGGGTATC TCTCTTGAAA CTTATGCTGT TGGCCGCCCT
GAGCTTGAGG TGATGGTCGA TGGGATAAAC AGAAAAAAGT AA
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| Protein sequence | MNTEDIKGFF ASREQLDMAD YLTLDYYLEC VGDIETALAH FCSEQSTAQW KRVDHDEDFR
PKYAARVISL TIEGELEALS YPVVHFETGP IHACRVTIAH PHRNFGAKLP NLLTAVCGEG
VFFTPGVPVV KLLDIGFPEA YLRAFDGPKF GIDGIRDLLQ AYDRPIFFGV VKPNIGLSPA
NFAEIAYQSW LGGLDIAKDD EMLADVDWSS LIERSRVLGE ARARAEKETG EPKIYLANVT
DEVDRLLEQH DIAVSNGANA LLINALPVGL SAVRMLARHT KVPLIGHFPF IAAFSRMEKY
GVHSRVMTKL QRLAGLDSII MPGFGSRMMT PEEEVKDNIA ECLQEFGHIR RSLPVPGGSD
SALTLETVYR KVGSVDFGFV PGRGIFGHPM GPRAGAMSIR QAWEAIEQGI SLETYAVGRP
ELEVMVDGIN RKK
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