| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2333 |
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| Symbol | |
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| ID | 6462309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2407954 |
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| End bp | 2408778 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728522 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002019145 |
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| Protein GI | 194337351 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00168385 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAGAC TGGATGAGAA GGTTGCCGTC ATTACCGGTT CAACCAGAGG AATCGGTAAA
GCGATAGCTC ATGAGTTTGT GCGCCAGGGC GCAAAGGTGG TTATAACCTC TTCTTCGAAT
GCCAATGTTC AGGCGGCTGT TGCGGAGTTT CCTCCGGGCA GCGCCTTCGG CTGTGTCTGT
GATGTTGTTT CGGCTGCTGA TATGGAGCGC CTGATTGATG CGGCGACAAA GAGGTTTGGC
CGGATAGACT GTTTTATCAA TAATGCGGGA ATCTCTGATC CCTTCATGAA CATTACAGAG
AGTGATCCTG AGCGATGGGG AAGGGTTATT GATACCAATC TTAAGGGTAC CTATAATGGC
TGTCGTGCGG CAATCAGCTA TTTTCTCAGG GAAGATATTC CAGGCAAGAT TATCAATATG
GCTGGTTCGG GCACAGACAG TGGCTCAAAC ACACCGTGGA TGAGTGCCTA CGGTTCCACC
AAGGCTGCCA TAGCCCGTTT TACCTATGCG GTTGCTGCGG AGTATAAACA TACCGGGATC
TCTGTCATGC TGCTCCATCC TGGTCTGGTG CGTACCGGGA TGGTCAGTTC CGATAACCCG
ACACCTGAAC TTTCCCGGCA GTTGGCCACC TTCAGTACCA TTCTTGATAT TTTTGCCCAG
TCGCCGTCGG TCGCCGCAAA GCTTGCGGTA CAGTTGGCTT CTGACTGGAG CGACTCCAAA
ACCGGTATCT ATCTTTCCGC TCTTCGTGGA AGAAGAAAAA AATGGTTGCT CCTCACCTAT
CCCTTCCGTA AAATGATGAA CAGGATTGAC CGCCGAACCT ATTAA
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| Protein sequence | MGRLDEKVAV ITGSTRGIGK AIAHEFVRQG AKVVITSSSN ANVQAAVAEF PPGSAFGCVC
DVVSAADMER LIDAATKRFG RIDCFINNAG ISDPFMNITE SDPERWGRVI DTNLKGTYNG
CRAAISYFLR EDIPGKIINM AGSGTDSGSN TPWMSAYGST KAAIARFTYA VAAEYKHTGI
SVMLLHPGLV RTGMVSSDNP TPELSRQLAT FSTILDIFAQ SPSVAAKLAV QLASDWSDSK
TGIYLSALRG RRKKWLLLTY PFRKMMNRID RRTY
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