| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2330 |
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| Symbol | |
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| ID | 6462263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2405211 |
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| End bp | 2406638 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728519 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_002019142 |
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| Protein GI | 194337348 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.402524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGAA AATTTGTAGT ATGTGCGACT CTTCTGGTCG CGCTCCTGGA GTCATCAACA
GCATTTGCTA CGAACGGCAT GAACCTTGAG GGGTATGGCG CCAAATCACA TGCTCTCGGT
GGAGCTGGTA TGGCCTTTGA TACGGGTAAC TCTGCCGTGA TGAATAATCC GGCGACACTT
GGGATGATGA AAAATGGCCA GGAAGAGATT GGCCTTGGTA TCAGGGGGCT TCACCCAGAT
GTGTCGGTCG GGTATGGCTC TTTGTCAGAC AAGTCTGAAG GAACAGCATA CTACATGCCC
TCTCTTTCCT ATATGAGAAA AGATGGCAGC ATTGCCTGGG GTGTGGCTGT TCTTGCCCAG
GGTGGGATGG GAACGGAGTA TGGCAAAAAT TCCCCCCTTT TCCAGTACGG GATGCCCATG
TCTATGAGTG GAGCAGTTCC TCTGAGTGGC GAGGCTATTC GATCAGAAGT TGGTATCGGT
CGCCTGATGT TTCCTCTTGC CTGGAATCTC ACTCCAAATA CGACCATTGG TGCATCACTC
GATCTTATCT GGGGAAGCAT GGATCTGCAG ATGGATATGG ATGGCGCTCA TTTTGCCGGG
ATGGCAATGC AGGGCCAGGG TGGCTCGGTC AGTGGCTCCA TGTTTAATAC ACTCGGTTCA
TTCATCAGTT CTGGCGCGAT TACTGACGTT AATTATGTTC GTTTTGACTT TTCCAATGGC
ACTCCATTTA TGGGTGAGGC GGTCGGGTAT GGATCGGGGT TCAAGACGGG ATTTACACAC
AAGTTCAGCA ATCTTCTGAC CATCGGGGCC ACTTATCACT CAAGGATAGC GCTCTCTGAT
ATGAAGAGTT CAAGGGCGAC GCTCTCTTTT TCAGGAGCAG GGCCGGCATT CACTCAATCC
GATCCGGTAT CGGTCAGTGG CACCATCAAG GTCAAGAATT TTGGGTGGCC GGAAACCTGG
GCGGCAGGTC TTGCCCTCTA TCCGGCAAAG CGCTGGATGA TTGTCGGTGA TGTCAAATAT
CTGGACTGGT CATGGGCAAT GAGCAAATTC AGCACCACTT TTATTGCCGA CAATTCTGCA
TCGAACGGCC CGTTTCAGGG ACAGACACTT GATGTGGATA TGACCCAGAA TTGGGATGAT
CAGTGGATTT ATTCAATCGG TGTGCAGTAT AAGGCATCGG AGCGGCTTGC ACTTCGTGCA
GGGGCAAGTT TTTCGACCAA TCCTGTTCCG GACAGCTATC TTAATCCGAT GTTTCCTGCG
ATTACCGAAA ATCATTATAC CGGTGGTTTC GGTTATAAGT TGACGGATAA ATCAACAGTT
TCCGCCGCAC TTGTGTTTGT CCCGGAAGTA ACGGCAACCA ATGCCGATGG TCTGGTCATC
AGTCACAGCC AGATGAACTG GTCGCTGAAC TATGCACACC AATTGTAA
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| Protein sequence | MTRKFVVCAT LLVALLESST AFATNGMNLE GYGAKSHALG GAGMAFDTGN SAVMNNPATL
GMMKNGQEEI GLGIRGLHPD VSVGYGSLSD KSEGTAYYMP SLSYMRKDGS IAWGVAVLAQ
GGMGTEYGKN SPLFQYGMPM SMSGAVPLSG EAIRSEVGIG RLMFPLAWNL TPNTTIGASL
DLIWGSMDLQ MDMDGAHFAG MAMQGQGGSV SGSMFNTLGS FISSGAITDV NYVRFDFSNG
TPFMGEAVGY GSGFKTGFTH KFSNLLTIGA TYHSRIALSD MKSSRATLSF SGAGPAFTQS
DPVSVSGTIK VKNFGWPETW AAGLALYPAK RWMIVGDVKY LDWSWAMSKF STTFIADNSA
SNGPFQGQTL DVDMTQNWDD QWIYSIGVQY KASERLALRA GASFSTNPVP DSYLNPMFPA
ITENHYTGGF GYKLTDKSTV SAALVFVPEV TATNADGLVI SHSQMNWSLN YAHQL
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