| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2318 |
|---|
| Symbol | |
|---|
| ID | 6462528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2394631 |
|---|
| End bp | 2395008 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642728507 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002019130 |
|---|
| Protein GI | 194337336 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000483408 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGATG ATTTAATCCA TCAGGTGCAG GAAGCAATTG CATACTCCGG AAGTTGGGCA
GAGAAGGGGT GGCCTGTTAC GTTTGGACCA AACAATATTG AGGTTTCAAC TCTCAAACAG
GCCCAGGCTC TTCCCCGGAA TTTTGTTTAC CGCGATGAGG CTGTGAATTA CTGGCAACAG
GTTCTGCTGA CAGGAAACGA TACTGCTGTT GCCGGCAGAA AGGCATTGGC AGCCCTGAAA
GAGGGTAATC TGCAGGCCGC TGCCGATGCG CTCTATCTGT CGCAGTATAT CGAGAAACCT
TTTGCTGCCA GCTCCGCTAC CTGGGCTCCT TTGTATGAAG CCCTGAAGCA GGACATGGCG
GAGAAACAGG TTGTGTGA
|
|---|
| Protein sequence | MYDDLIHQVQ EAIAYSGSWA EKGWPVTFGP NNIEVSTLKQ AQALPRNFVY RDEAVNYWQQ
VLLTGNDTAV AGRKALAALK EGNLQAAADA LYLSQYIEKP FAASSATWAP LYEALKQDMA
EKQVV
|
|---|
| |