Gene Ppha_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2299 
Symbol 
ID6461899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp2380035 
End bp2380655 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID642728488 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002019111 
Protein GI194337317 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGCCG GTTCAATTTT TTTTGAAGCG CTTATGCAAG TGATTATAAC AGCCATACCA 
GATGTTCTGA TATTTGAACC GAAGGTTTTT GGCGATGATC GGGGCTATTT TTTTGAATCG 
TTCCGGCAGG ATCTTTTTGA GCAGCATGTC GGTCATGTTG CCTTTGTGCA GGATAATGAG 
TCGAAGTCGG GGTACGGAGT GCTTCGCGGT CTTCATTTTC AGAAACCGCC ATTTACGCAG 
TCCAAGCTTG TTCGTGCCCT TTATGGCAGT GTGCTTGATG TTGCTGTCGA TCTGCGTCTT 
GGTTCCCCCT GGTACGGTCG TCACGTCTCC TGTCTGCTCG ATACCGAGCG GAAGCGAATG 
CTCTGGGTTC CAAAAGGGTT TGCCCACGGC TTTCTTGTGC TCTCCCAAGA GGCGGTTTTT 
GCCTACAAGT GCGATAACTA CTATACGCCA TCGCATGATG CCGGTATTCG ATGGAACGAT 
CCATCCCTCG CCGTCGACTG GCAGCTTCCG CCGGAAGTGA TCAGGGTCTC TGGCAAAGAT 
GCCGAACAGC CTGCCTTCTC CTCAGTTGAC ACCTTTGCGT ATGAAGCGTT CCGGCAGGAC 
AAGCTCTATC CCCGGAAATA G
 
Protein sequence
MIAGSIFFEA LMQVIITAIP DVLIFEPKVF GDDRGYFFES FRQDLFEQHV GHVAFVQDNE 
SKSGYGVLRG LHFQKPPFTQ SKLVRALYGS VLDVAVDLRL GSPWYGRHVS CLLDTERKRM 
LWVPKGFAHG FLVLSQEAVF AYKCDNYYTP SHDAGIRWND PSLAVDWQLP PEVIRVSGKD 
AEQPAFSSVD TFAYEAFRQD KLYPRK