| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2285 |
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| Symbol | |
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| ID | 6461833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2362523 |
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| End bp | 2364016 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728474 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_002019097 |
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| Protein GI | 194337303 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00605191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGTGGAG TTTTCGGTGT CTTTAATTCA AAAACTCCCG CGGAAGATAC CTTCTATGGA
CTGTACTCAC TGCAGCACAG GGGACAGGAA GCCGCAGGTA TAGTCGTCGC AGAATACAAT
AAAATCAAAA AAAAGACCCT CTTCAAGCAG CACAAGGGGA TGGGTCTGGT GGCAGAGGTT
TTCAGGGATG AAACGGTGTT TGAACGGCTC GGAGGTTATG CCGCGATAGG TCATAACCGC
TATTCGACCA CTGGCTCGGC CTCATCGGCA AGCAACATTC AGCCCTTTTC CCTCACCTAT
CGCTCCGGAA GTCTCGCGAT TGCCCATAAC GGAAACCTCA CCAACTCCCG CACACTGCGG
CGTGAGCTGA CGGAGCTCGG CGTTATCTTT CAGGCCTCTT CGGATACTGA AATCATCCCC
CATCTGGCTG CACGAAGCCG TGAAAAAGAG CCGATACACC AGCTCTATGA GGCTTTGTTA
CAGGTGCAGG GCGCCTACTC GATGGTACTT TTGGCCAATA ACCAGATGAT CGCCGCCAGG
GATCCCTATG GCTTCAGACC GCTCGCTCTC GGCAAAAAGG TTGATCCTCT CACCGGTGAG
CTTGCCTATA TTGTTGCCAG TGAAACCTGC GCCTTTGATA TCATCCAGGC AGAATATATC
CGGGATATTG AACCTGGCGA AATTCTCTTG ATCGACCATC TGGCGGTCGC AAATGAAAAG
CCAACCTCGC TTTTTCTTCC ACCTTCAGAG CGCAAAGCCC GCTGTATTTT CGAATATGTT
TACTTTGCCC GCCCAGACAG TTTTATTTTC AAGCATTCGG TTGACAAAAT CAGACGCAAT
CTCGGAAAAA ACCTTGCACG GGAATCCTCT ATTCAGCACC AGCCCGGTGA AAAAGAACTG
ACCGTTGTCA GTGTTCCCGA CTCATCCAAT ACCGCCGCAC TCGGCTTTGT GCGGGAAAGC
ATTAAAATGG AACGACCGGC AAGGTTCGAG CACGGCCTTA TCCGCAACCA CTATGTCGGC
AGAACCTTCA TTCAGCCAGG TATTCACAGC CGTGACATCA AGGTGCGTTC CAAGTACAAC
ATTGTGCGTG GCGTACTTCT CGACAGGCCA ATCATTCTTG TCGATGACTC CATTGTACGC
GGCACAACGG CAAAAATGCT CATCAAACTG ATTCGTGAGG CCGACCCAAA GGCAATTCAC
CTGCACATCA GCTCCCCGCC TATCACCAAT CCCTGCTTTT ATGGTATGGA TTTTCCGACC
AAACGGCAGC TCCTCACCCA CATGTTCGAC AGTCTTGATA ATGATGAGGA GGAGATTGAA
AAAATCAGGG AATATATCGG CGTTGATTCG CTGAAATACC TTTCCATGCA GGGACTGATG
AACAGCGTCC CTTCATTTGA GGGAGAAACC TGCAGCTACT GTACTGCATG TTTCAGTGGT
GACTACCCTA TCGAAGTCAG CGATGCGACA ACCGATAAAG ATGAGAACGA CTGA
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| Protein sequence | MCGVFGVFNS KTPAEDTFYG LYSLQHRGQE AAGIVVAEYN KIKKKTLFKQ HKGMGLVAEV
FRDETVFERL GGYAAIGHNR YSTTGSASSA SNIQPFSLTY RSGSLAIAHN GNLTNSRTLR
RELTELGVIF QASSDTEIIP HLAARSREKE PIHQLYEALL QVQGAYSMVL LANNQMIAAR
DPYGFRPLAL GKKVDPLTGE LAYIVASETC AFDIIQAEYI RDIEPGEILL IDHLAVANEK
PTSLFLPPSE RKARCIFEYV YFARPDSFIF KHSVDKIRRN LGKNLARESS IQHQPGEKEL
TVVSVPDSSN TAALGFVRES IKMERPARFE HGLIRNHYVG RTFIQPGIHS RDIKVRSKYN
IVRGVLLDRP IILVDDSIVR GTTAKMLIKL IREADPKAIH LHISSPPITN PCFYGMDFPT
KRQLLTHMFD SLDNDEEEIE KIREYIGVDS LKYLSMQGLM NSVPSFEGET CSYCTACFSG
DYPIEVSDAT TDKDEND
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