Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2282 |
Symbol | |
ID | 6460933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2359731 |
End bp | 2360573 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642728470 |
Product | endonuclease IV |
Protein accession | YP_002019094 |
Protein GI | 194337300 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000448343 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGG TTGGAGCACA TGTCAGTACT GCCGGAGGGG TGGAAAATGC TCCCCTGCAG GCGACCAGCA TCGGGGCAAA AGCTTTTGCA CTCTTTACCA AAAATCAGCG GCAGTGGAAA GCACCGAAAC TGACGACCTC CTCAATTGAG GCTTTCAAAA AAAACTGTGA GGCTGGAGGA TTCCGCCCTG AACACATCCT GCCGCACGAC AGCTATCTGA TTAACCTCGG CAGCCCTGAT CCTGAGAAGC TCCAGCGTGC ACGTGAAGCT TTTATTGAGG AGATGCAACG GGCTGAAGAG CTTGGATTGC TGCTGCTGAA CTTTCATCCG GGTAGCCATC TCAAGGAGAT TGCGGAAGAG CGATGCCTGG AGCTGATTGC TGAATCCATC AACAGGGCGC TTGATGCAAC CAAAACCGTT ACTGCGGTGA TTGAGAATAC CGCCGGACAG GGCACCAATC TCGGCAACCG GTTTGAACAG TTGGCATTTC TTGTTGACCG GATTGAGGAT AAAACGAGAG TTGGAGTCTG TCTCGACACC TGCCACCTCT TCGCCAGCGG CTACGACCTG CAAACAACCG CAGCAATTGA GTCAACCTTT ATGGAGTTCG ACCGGATTGT TGGCCTCCGC TACCTGCGCG GGATGCACCT GAATGACGCA ATGCAGCCGC TCGGCAGCCG GATTGACCGT CATGCGGGTA TCGGCAAGGG AACGATAGGG ATGGATGCTT TCAGATGGAT CATGAATAAT CCTGCCTGTG AAGAGATTCC CCTGATCCTT GAAACACCGG ATTCTGCCGC CTGGAGCGAA GAGATCAGCC TTCTCTACGC TCTTGAGCAG TAA
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Protein sequence | MKRVGAHVST AGGVENAPLQ ATSIGAKAFA LFTKNQRQWK APKLTTSSIE AFKKNCEAGG FRPEHILPHD SYLINLGSPD PEKLQRAREA FIEEMQRAEE LGLLLLNFHP GSHLKEIAEE RCLELIAESI NRALDATKTV TAVIENTAGQ GTNLGNRFEQ LAFLVDRIED KTRVGVCLDT CHLFASGYDL QTTAAIESTF MEFDRIVGLR YLRGMHLNDA MQPLGSRIDR HAGIGKGTIG MDAFRWIMNN PACEEIPLIL ETPDSAAWSE EISLLYALEQ
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