Gene Ppha_2269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2269 
Symbol 
ID6462227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2352146 
End bp2353342 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content48% 
IMG OID642728457 
Productgeranylgeranyl reductase 
Protein accessionYP_002019081 
Protein GI194337287 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCT ATGATGTTGT TATATCAGGC GCTGGTCCTG CGGGATGTTC GTCTGCGTTG 
TTTCTTGCCC AAAAAGGGTG CCGTGTTTTG CTGCTCGACA AGGCGACGTT TCCAAGAGAG
AAGGTTTGCG GAGACGGTAT CACTGCAGCT TCTTCGACTC TTCTTGAAGA GATGGGCGTT
ATGGATCGTC TTCGCCTTCG GCTGGGCCCA TTGATGGTAT GTAAAGGCGT TACCATCTTT
TCTCCTGCCG GGACTGTTTT GCAGGGGAGA ATCTTGCAAA CCGGGAGTTT GACTGGTGCG
ACCTATGTTA TTCCAAGAAA AGAATTTGAT GACTGCCTTA TTGCCTGCGT GAAAGAGCAC
TCTTCGATCA CCCTTCTCGA AAATACGACC GTTACCGATA TCATCATGGA AGGTGACAGA
GCGAGAGGTG TAAGAAGTTC CGGAGGTGAC TGGTTCGGTC GTGTTGTCAT TGCTGCCGAC
GGGGCCTATT CTCCAATAGC TTCCCGGTTG CATCTGGCAA ACAAGGAGAA AAAGCATCAG
GGGTTTGCCA TTCGTGCCTA TTACTCAAAG GTTGAGGGGT TGACGGATTC CATAGAACTC
CATTACGACA AGTCCATGGT TCCTGGTTAT GGCTGGATAT TTCCTTTAGG TAATCAGAGA
GCCAATGTCG GGGTGGGCCT TATGACCCGT TTCAAAGATC AGCGCGGTCT CAAGCAGTTG
TTTGAGCGGT TTGTTGGTGA GAATGCGTTT GCATCGGCAA AGTTGAAACA TGCTGTTATG
GAGCCGGGAA CACTCAAAGG GTGGCCTCTT CCTTTTGGCT CTTTTCAGGG AAAAAGAGGT
CGTGGTAATG TGCTGCTCAC CGGGGATGCT GGCAGTTTTG TAGATCCTCT GAATGGTGAA
GGGATATATT ATGCGTTGAA AAGTGGCCGG TATGCTGCAG AGGCCGCTGC AAGGGCTCTG
GATGAAGAGG AAATTCGGGC TTCAATGTAT TACGAGAAGC TCTGGCGAAA AGAGTTTTCA
TTTCACGAGT TTACTCTTGG GTATGCTCTT CAGCCTTTGC TGAATAATGA GTTTCTACTG
GAGTCGCTCA TGAGGTTTGC GGCTAAAAAA CAAACACGGG CAAACTTGTT AGCCGGGGTC
ATCGGTCATA ATTTTAAAAA ACGTGATTTG CTCAAATTAA TACCTCCTTT TTCGTGA
 
Protein sequence
MKSYDVVISG AGPAGCSSAL FLAQKGCRVL LLDKATFPRE KVCGDGITAA SSTLLEEMGV 
MDRLRLRLGP LMVCKGVTIF SPAGTVLQGR ILQTGSLTGA TYVIPRKEFD DCLIACVKEH
SSITLLENTT VTDIIMEGDR ARGVRSSGGD WFGRVVIAAD GAYSPIASRL HLANKEKKHQ
GFAIRAYYSK VEGLTDSIEL HYDKSMVPGY GWIFPLGNQR ANVGVGLMTR FKDQRGLKQL
FERFVGENAF ASAKLKHAVM EPGTLKGWPL PFGSFQGKRG RGNVLLTGDA GSFVDPLNGE
GIYYALKSGR YAAEAAARAL DEEEIRASMY YEKLWRKEFS FHEFTLGYAL QPLLNNEFLL
ESLMRFAAKK QTRANLLAGV IGHNFKKRDL LKLIPPFS