| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2249 |
|---|
| Symbol | |
|---|
| ID | 6461187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2332642 |
|---|
| End bp | 2333346 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642728437 |
|---|
| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
|---|
| Protein accession | YP_002019061 |
|---|
| Protein GI | 194337267 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.57445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGCAA CTGCCGATAA AGAGATTACC ATTGTTCTTG CCACCGCCAA TCGGGACAAG
GTCAAAGAGC TTCGTCCTCT GCTTGAAACA ATCTCTCCCC TGTTCACTGT TCGGACACTC
CATGAGCTTG GTGTGGATGT CGAGATTGAG GAAACAGAGG AGACGCTCGA AGGAAATGCC
CTGCTCAAGG CAAGGGCGAT TTTCGCCATT CTCTCTGAAC GCTTCCCCTT TATGATTGCA
CTGGCAGACG ATACCGGGCT GGAAGTGGAT GGGCTTGATG GAGCGCCGGG TGTTTACTCT
GCACGATTTG CTCCTGTGCC GGATGGCCAG AGTCCAACGT ATAAAGACAA TGTTGCTCAC
CTGCTGCACT GCATGAAGGG TATCGCCAAC CGAGAGGCTC GTTTCAGAAC CGTTATTGCG
CTGAAAGGCG CTCTCCCGTC TGCGGAAGGA TGCTTCCGGT TTGAACACAC TGCTGAAGGA
GTGGTTCCCG GCAGCATAAC CCTTGAAGAA CAGGGTGTTG AAGGGTTTGG TTATGATCCC
CTTTTTCTGG TACACAACAC CGGGAAAACC TATGCTGAAA TGAGCACGAC AGAAAAAAAC
AGGCTCAGTC ACCGCGCCCT TGCCGTTCAG CATGCTGTAA ACTACCTTAA GAACATTCTT
CAGCAGAAAA GCGTTCTGCC AACCGATACA ACGACACATC CATGA
|
|---|
| Protein sequence | MPATADKEIT IVLATANRDK VKELRPLLET ISPLFTVRTL HELGVDVEIE ETEETLEGNA
LLKARAIFAI LSERFPFMIA LADDTGLEVD GLDGAPGVYS ARFAPVPDGQ SPTYKDNVAH
LLHCMKGIAN REARFRTVIA LKGALPSAEG CFRFEHTAEG VVPGSITLEE QGVEGFGYDP
LFLVHNTGKT YAEMSTTEKN RLSHRALAVQ HAVNYLKNIL QQKSVLPTDT TTHP
|
|---|
| |