| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2221 |
|---|
| Symbol | |
|---|
| ID | 6460863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2305904 |
|---|
| End bp | 2306329 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642728411 |
|---|
| Product | protein of unknown function UPF0047 |
|---|
| Protein accession | YP_002019035 |
|---|
| Protein GI | 194337241 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCA TTACGCACAC GATCAGGATA CAAACCACAA AGCCCGTTGA AATCATCGAC
ATAACCCCGG AAGTAACAAC AGCTCTTGTA TCATCAGGGC TGCAGCAGGG GCAGGTAACC
ATCATTAGCC AGCATACCAC GGCCTTTATC AATATCAACG AAAAAGAGGA GCGACTCCTT
GAAGATATGG AGACCTGGCT CAAGCGTCTG GTACCGAAAG ATGGAAACTA TCTCCACAAT
CTCAACCCGA TTGATGGCCG CCACAATGCG CACTCCCACC TTCTCGGCCT CTTTATGAAC
AGCTCTGAAA CCATTCCCTT CTCGGATGGA AAGTTGCTCC TCGGAGAGTG GCAGTCACTC
TTCTTCGTTG AGCTTGACGG AGCACGCAAA GAGAGAAAGG TGCTCGTTCA GATATCAGGC
ATATAA
|
|---|
| Protein sequence | MRIITHTIRI QTTKPVEIID ITPEVTTALV SSGLQQGQVT IISQHTTAFI NINEKEERLL
EDMETWLKRL VPKDGNYLHN LNPIDGRHNA HSHLLGLFMN SSETIPFSDG KLLLGEWQSL
FFVELDGARK ERKVLVQISG I
|
|---|
| |