| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2220 |
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| Symbol | |
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| ID | 6460891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2304383 |
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| End bp | 2305825 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728410 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002019034 |
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| Protein GI | 194337240 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCTC TTGTTTACGA AATCAATACA AGAATCTGGC TACAAAAACT GAGCAGAGAG
CATAACCGGC CTGTAACGCT TGGGAATATA CCGGACTCAG CATTCAACTT CTTTACAAGC
TGCAATTTTG ACATGGTATG GCTGATGGGT GTATGGAAGC CAAGTCAGTA CAGCAAGGCA
ATTGCAACAG CACACCCCGG TCTTCGAAGC TCGTTCCTTG AGCACATTGC TCTCATTGAG
CCTGGCGATA TTGCATCATC ACCCTATTCC ATTCCTTCAT ACACCGTCAA TGACGCTCTG
GGAGGAGAAG AGGAGCTGAT TGTATTCCGC GAAAAACTTC GTGATTACGG CATCAAGCTT
ATGCTTGATT ATGTGCCAAA CCACCTTGCA CTCGACAATG AATGGCTCCC GGAACACCCG
GAATACTTTA TTCCTGTATC CAAAGCTGAA CAGAGCCAGG ATCCCCGATC CGGTTTTGAA
TATATATGCG GAACATATCT GGCTTACGGC AAAGACCCTT ATTACGACCC TTGGACAGAC
ACACTTCAGC TCAACTATGC AAGAAAAGAG ACCCGGGAAA TGATGACGGA AAATCTTTTC
AAAATCAGCA CACTCTGTGA TGCCGTCAGA TGCGATATGG CCATGCTGAT TCTGAAAAGT
GTTTTTAATA CCACCTGGAG CAACCTCGGT GGCGCCATGA AGGAGGAGTT CTGGTACAAC
GCAATCACTG CGGTCAAGCG CCGTCATCCC GACTTTATAT TTCTTGCCGA ATCTTACTGG
AACAAGGAGT GGGAACTGCA GCAGCAAGGT TTTGACTTCA CCTACGACAA ACCCTTTTAT
GACTATATCA GCAGCTCCCC CGTCAATGTT GAAAAGCTTG ATGGACACAT GCAGGCACAT
TGGGAGTACC AGCGCCATCT CTGCCGCTTC CTTGAAAACC ATGACGAACC AAGAGCTGCC
GATAAAATCG GTCTCAACAA CAAAGCTGCC GCTCTGGTGC TGCTGACTGC TCCGGGAATG
CATCTTGTCC ACCAGGATCA GATGGATGGC TTCCGGCAGA AAATTCCGGT TCAACTTATC
CGGCAGGCTC CCGAACCTGA TAACATCGAC CTCTCTGTGC TCTATCAAAA GCTTTTTACG
CTTCAGAAAA AAAAGGTATT TCAGGAAGGA GAAGTTGAGC AGCTTGAAAT GCACAGTGCC
AACAAATCAA ACTGTCTGGG ATTTCACCGT TTTACCGCCA ATGAACACGC CTTTGTTCTG
GCCAATTTCA GTGCAACCGG AATTGCCATA GAGTTCGAAC ATCCCTCGAT TGATCATATC
GCCATTGAAA GGCTGACCCT CCAAAGCACA CTTGCTGACA AAAAAATCAG CGATATTCAT
TGTGCAGAGA ACGTTACACG GGTCAATCTC TCTCCTCACG AAGGAATTGT CATCACCTGC
TGA
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| Protein sequence | MFPLVYEINT RIWLQKLSRE HNRPVTLGNI PDSAFNFFTS CNFDMVWLMG VWKPSQYSKA
IATAHPGLRS SFLEHIALIE PGDIASSPYS IPSYTVNDAL GGEEELIVFR EKLRDYGIKL
MLDYVPNHLA LDNEWLPEHP EYFIPVSKAE QSQDPRSGFE YICGTYLAYG KDPYYDPWTD
TLQLNYARKE TREMMTENLF KISTLCDAVR CDMAMLILKS VFNTTWSNLG GAMKEEFWYN
AITAVKRRHP DFIFLAESYW NKEWELQQQG FDFTYDKPFY DYISSSPVNV EKLDGHMQAH
WEYQRHLCRF LENHDEPRAA DKIGLNNKAA ALVLLTAPGM HLVHQDQMDG FRQKIPVQLI
RQAPEPDNID LSVLYQKLFT LQKKKVFQEG EVEQLEMHSA NKSNCLGFHR FTANEHAFVL
ANFSATGIAI EFEHPSIDHI AIERLTLQST LADKKISDIH CAENVTRVNL SPHEGIVITC
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