| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2189 |
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| Symbol | |
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| ID | 6461427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2273019 |
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| End bp | 2274050 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728382 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_002019006 |
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| Protein GI | 194337212 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00134811 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA GCAAAAACCT TTTTCAGAGC ATTGTAACCT TCGAAAATGT GCTTTCAGCA
GCCCAAAAAG CGGCGAAAGG AAAGCGCGAA AACCAGTCGG TGCTGCACTT TTTCACCTTT
CTGGAAGAGA ACCTCTGGCA GATTCTTTCG GAGTTGCGAA CGAAAACCTG GCAGCCCGGT
TCATACAAAA CCTTCAGCAT CTACAAGCCA AAACCAAGAA TGATCAGCGC AGCTCCCTTT
AAAGACCGCG TTGTGCATCA TGCCCTGATC ACTATTGTTG GCCCTCTTCT TGAACGGAGC
TTTATTTTCG ACACCTATGC CAACAGAACG GCCAAGGGAA CACACAAGGC CATAGAGCGC
TACCAGCACT ATCTGAAAAA GTATGCTTAT GTGCTGAAGT GTGATATCCG GAAATATTTT
CCATCAATCG ATCACGAGAT ACTCAAATCG TTGCTTCGCA GAAAAATAGC CTGCGCTGAC
ACTTTGTGGC TTATTGATAC CATTATTGAT AACAGTAACA TACAGGCAGA GCATTTTCAC
TATTTCCCCG GTGACACCCT TTTTACCCCT CATGAACGGA GAAAAGGGCT GCCTATCGGG
AACCTGACCA GCCAGTTTTT TGCCAACTAC TACCTCAGCT TTCTGGATCA CTACGTAAAA
GAGGTGTTGC GATGCAAAGG CTACGTAAGA TACGTTGATG ATTACGTCTT GTTTTCCGAT
AGCAAGGATG AATTGTGGGA GTGGAAAAAA GCAATCGAAG AGTTTTTGCA ACAATTCAGA
TTGACGCTTA ATTCAGGGAG AACAGAGCTT TACCCGGCAA CAGAAGGGAA GTGCTTTCTC
GGGCAAAAAG TTTTTCAGAG CTACCGGTTA CTTCCTTCAG CAAATGTTCG GAGAGCAAAA
AAACGGATAC AATGCACCCT GCTTGCCAAG CCGGAAACCT TGCAGAAAAG CCTTGCCGGG
TGGGTTGGTC ACGCCCGGCA GGCCGATACC CGCAATCTGT TGCGCTCGTT GGGGCTGGTG
GAAAAGAGCT GA
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| Protein sequence | MKTSKNLFQS IVTFENVLSA AQKAAKGKRE NQSVLHFFTF LEENLWQILS ELRTKTWQPG
SYKTFSIYKP KPRMISAAPF KDRVVHHALI TIVGPLLERS FIFDTYANRT AKGTHKAIER
YQHYLKKYAY VLKCDIRKYF PSIDHEILKS LLRRKIACAD TLWLIDTIID NSNIQAEHFH
YFPGDTLFTP HERRKGLPIG NLTSQFFANY YLSFLDHYVK EVLRCKGYVR YVDDYVLFSD
SKDELWEWKK AIEEFLQQFR LTLNSGRTEL YPATEGKCFL GQKVFQSYRL LPSANVRRAK
KRIQCTLLAK PETLQKSLAG WVGHARQADT RNLLRSLGLV EKS
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