| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2175 |
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| Symbol | |
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| ID | 6461843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2261062 |
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| End bp | 2262357 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728371 |
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| Product | homoaconitate hydratase family protein |
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| Protein accession | YP_002018995 |
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| Protein GI | 194337201 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAA CAATAACCCA GAAGATCCTT TCAAAAGCCG CAAACAGAAA ATTTGTCGAC
GCTGGTGAAA GCGTTTGGCT GAATGTCGAC ATCCTCCTTA CCCACGATGT CTGCGGGCCA
CCAACCTTTG ATATTTTCAA GCAGGAATTT GGCGCCGACG CAAAAGTATG GGATCCCCGT
AAAGTTGTCG TCCTGCCTGA CCACTATATT TTTACGGCAA ACGAGCACGC CCATCGCAAC
ATTGATCTCT TGCGCCAGTT TGCAAAAGAG CAGCAGCTTG AGCACTACTA TGATGTCGGC
ACCGACCGCT ACAAAGGCGT CTGCCATGTA GCCCTGGCGG AAGAGGGATT CAATCTGCCC
GGCACCGTGC TCTTCGGAAC CGACTCCCAT ACCTGTACTT CCGGAGCTTT CGGCATGTTC
GGCTCGGGCA TTGGCAACAC CGATGCAGCC TTCATTCTTG GCACTGGCAA GCTCTGGGAA
AAAGTTCCGG AATCCATCCT CTTCACCTTC GATGGTCAGA TGCCCGAATA TCTGACAGCA
AAAGATCTCA TTCTGCAGAT TCTTGGCGAC ATCACAACCG ACGGCGCAAC CTATTGTGCG
ATGGAATTTG ACGGCGAAGC GATTTTTTCC CTTCCGATGG AAGAGAGAAT GACCCTGACC
AACATGGCCA TCGAAGCGGG TGGCATGAAC GGCATCATCG CAGCAGACAG CATCGCAGAA
AATTATGTCA AGGCAAGAAG CCAGAAACCC TACGAGCTCT TCCAGAGCGA CCCGGATGCC
CGATATCACA GCAAGTACCG CTACGACGTC AGGACGCTTG AACCTGTGGT TGCACAGCCG
CACAGCCCCG ACAACCGCGC CACCGTCAGA AGTGTTCAGG GAACAAAGAT TACCAAGTCC
TATATCGGCT CCTGCACCGG CGGCAAACTG ACCGATTTTA TGATGGCCGC AAAAATTCTG
AAGGGTCATA AGGTTTCCGT TACCACCAAC ATCGTGCCAG CCACAGTAAA GGTTGCCCGT
GACCTTGAGT GCGAACTCTA CGACGGACAG AGCCTGAAAC AGATCTTTGA AGATGCCGGA
TGCACCATTG CCCTTCCCTC ATGCGCCGCA TGTCTGGGTG GCCCTGCCGA TACCGTCGGA
CGCTCGGTTG ACAACGATGT TGTCGTCTCA ACCACAAACC GCAATTTCCC CGGACGAATG
GGCAGCAAAC ATGCAGGGGT ATACCTTGCC TCCCCACTCA CAGCAGCCGC ATCGGCAATT
ACGGGTAAAC TCACCGATCC GAGAGATTTC CTCTGA
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| Protein sequence | MAQTITQKIL SKAANRKFVD AGESVWLNVD ILLTHDVCGP PTFDIFKQEF GADAKVWDPR
KVVVLPDHYI FTANEHAHRN IDLLRQFAKE QQLEHYYDVG TDRYKGVCHV ALAEEGFNLP
GTVLFGTDSH TCTSGAFGMF GSGIGNTDAA FILGTGKLWE KVPESILFTF DGQMPEYLTA
KDLILQILGD ITTDGATYCA MEFDGEAIFS LPMEERMTLT NMAIEAGGMN GIIAADSIAE
NYVKARSQKP YELFQSDPDA RYHSKYRYDV RTLEPVVAQP HSPDNRATVR SVQGTKITKS
YIGSCTGGKL TDFMMAAKIL KGHKVSVTTN IVPATVKVAR DLECELYDGQ SLKQIFEDAG
CTIALPSCAA CLGGPADTVG RSVDNDVVVS TTNRNFPGRM GSKHAGVYLA SPLTAAASAI
TGKLTDPRDF L
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