Gene Ppha_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2172 
Symbol 
ID6462006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp2257394 
End bp2258386 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content51% 
IMG OID642728368 
Productketol-acid reductoisomerase 
Protein accessionYP_002018992 
Protein GI194337198 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0059] Ketol-acid reductoisomerase 
TIGRFAM ID[TIGR00465] ketol-acid reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTTT ACTATGAGCA GGATGCCGAT CTCGGTTATC TTCAGGGAAA GAATATTGCA 
GTACTCGGTT ATGGCAGTCA GGGTCATGCC CATGCCCTGA ACCTCAAGGA GAGCGGCCTG 
AACGTCTGCG TCGGCCTTCG CCCCGAAAGC GCATCGTGCG CAAAAGCACG GGAAGCAGGC 
CTCGAAGTCA ACACCGTTGC TGAAGCAACA AAATGGGCCG ATATTGTGAT GGTGCTTCTC 
CCCGACCAGA ACCAGAAAGC GGTCTACGAC GCAGAAATTG CTCCGAACCT TGTTGCCGGA 
AATACCCTTG CTTTTGGTCA CGGCTTCAAT ATTCACTACA AACAGATTAT TCCGGCAGAG 
TCAATCAACG TTATCATGAT TGCGCCGAAA AGCCCCGGCC ACCTTGTACG CCGTACCTTT 
ACCGAAGGCA ACGGTGTCCC CTGCCTTATC GCAGTGCATC AGGATGCTAC CGGAGAGGCC 
AAACAGCAGG CGCTTGCATG GGCAAAAGCT CTTGGCGGAA CCAAGGCTGG CGTTATTGAA 
ACCTCCATCA AGAATGAGAC TGAAACCGAT CTTTTCGGTG AGCAGGCTGT GCTGTGCGGC 
GGTTCTGCCG AACTGATCAA AGCCGGTTTT GAAACCCTTG TTGAAGCAGG ATACCCGGAA 
GAGCTTGCCT ACTTCGAATG TATGCATGAG CTGAAACTGA TTGTGGATCT CTATTATGAA 
GGCGGCCTTT CAAGAATGAA CTACTCCGTC AGCGATACCG CTGAGTACGG CGGCATGACC 
CGCGGACCAC GCCTTATCAC TCCTGCGGTG AAGGCAGAGA TGAAAAAAAT TCTTGAAGAG 
GTACAGGATG GCCGTTTTGC CAAAGAGTTT ATCGATGAAT GCAACGGTGG CTACAAAAAC 
CTGAACAAAC TCAGAGAGGA AAACAGTGGT CATGCCATTG AAAAGGTAGG CGCAAAACTT 
CGCGACATGA TGAGCTGGCT GATCAAAAAA TAA
 
Protein sequence
MNVYYEQDAD LGYLQGKNIA VLGYGSQGHA HALNLKESGL NVCVGLRPES ASCAKAREAG 
LEVNTVAEAT KWADIVMVLL PDQNQKAVYD AEIAPNLVAG NTLAFGHGFN IHYKQIIPAE 
SINVIMIAPK SPGHLVRRTF TEGNGVPCLI AVHQDATGEA KQQALAWAKA LGGTKAGVIE 
TSIKNETETD LFGEQAVLCG GSAELIKAGF ETLVEAGYPE ELAYFECMHE LKLIVDLYYE 
GGLSRMNYSV SDTAEYGGMT RGPRLITPAV KAEMKKILEE VQDGRFAKEF IDECNGGYKN 
LNKLREENSG HAIEKVGAKL RDMMSWLIKK