| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2167 |
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| Symbol | |
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| ID | 6462080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2249533 |
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| End bp | 2251230 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728363 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002018987 |
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| Protein GI | 194337193 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCTG ATACCATAAA AACAGGGTTT GAAAAAGCGC CGCACCGCAG TCTTCTTAAA
GCTACCGGTT CTATTGTCTC AAATAATGAC TTTAAAAAAC CCTTTATCGG GATCTGTAAC
TCCTATAACG AACTCATCCC GGGCCACTCC CACCTGCAGG AGCTGGGTCG CATCGCAAAA
GAGGAGGTTC GTAAAGCAGG AGGAGTGCCT TTCGAGTTCA ATACCATCGG GGTATGCGAC
GGCATTGCAA TGGGCCATAT CGGTATGCGC TACTCGCTTG CAAGCCGTGA ACTGATAGCC
GACAGTGTCG AAACCGTTGC ACAAGCCCAC TGCCTCGACG GGCTTGTCTG TATTCCAAAC
TGCGACAAAA TCACTCCTGG CATGATGATG GCCGCGCTGC GCATCAACAT CCCGGTTATC
TTTGTCTCCG GCGGCCCCAT GAAAGCCGGC CACACCCCTT CAGGTCAAAC GGTTGACCTG
ATCTCGGTCT TTGAAGCTGT CGGCCAGTTC AGCGCCGGTA AAATCGGCAA CGAAGAACTT
GAATCCATTG AAGAGAGCGC CTGCCCGGGT TGCGGCTCCT GTTCGGGCAT GTTCACCGCA
AACTCAATGA ACTGCCTCAG TGAAGCGCTT GGCTTTGCCC TGCCCGGCAA TGGCACCATC
CTCGCCATTG ATCCACGGCG CAACGAGCTG GTCAGAGAGG CCTCCCGCCG CATTATTGAT
CTCGTTAAAA AAGATATCAA GCCACGCGAT ATTCTCTCGC GCAACGCCCT GCTCAACGCT
TTTGCCCTTG ATTTCGCAAT GGGAGGCAGC ACCAACACCA TCCTGCATAC ACTCGCCATT
GCAAACGAAG CTGAGCTCGA TTTTAATTTT TCTGAGTTGA ACGCCCTTTC AGCCAAAACA
CCCTATATCT GCAAGGTCAG CCCTGCAACA ATGGCTGTCC ATATCGAAGA TGTAGACCGG
GCAGGTGGTG TATCGGCTAT CCTTCATGAG CTCAGCAGAA TTGACGGACT GCTTGACCTC
TCCACCTTAA CCGTAACCGG CAAAACACTT GGCGAAAACA TCGCCGACGC AGAGATTCTT
GACTACACCG TCATCAGAAG TATTGACGAA CCCTACTCCG CAACGGGCGG CCTTGCCGTT
CTTTTCGGAA ACCTTGCTCC GCAGGGAGCC GTGGTCAAAA CCGGTGCAGT AGCCCCTGAG
ATGATGAAGC ATACCGGTCC GGCGAAAATC TATGACTGCC AGGACGACGC CATCAAAGGC
ATTATGGGTG ATGATGTCAA GGCCGGAGAT GTGGTCGTGA TCCGCTATGA AGGCCCTAAA
GGAGGTCCCG GAATGCCGGA AATGCTCTCT CCCACCAGCG CCATCATGGG CCGCGGGCTT
GGAGAGTCGG TTGCACTCAT TACCGACGGA CGCTTCTCAG GAGGATCAAG AGGAGCCTGT
ATAGGCCATA TTTCTCCCGA AGCTGCCGAG CGCGGCCCGA TTGCCGCTTT GCATAACGGT
GACTTAATCA CCATTGATAT TCCGTCAAGG AGCATCTCGG TCAATCTGAC CGAAGAAACG
ATCAATGAGC GGCTGGCAGC GCTAAAGCCG TTTGAACCAA AAATAAAAAA AGGATATCTG
GCCAGATATG CACAAATGGT CACCTCTGCC AATACCGGAG CAATCCTGAA AAATCCTGTT
TCCTGTGAAC CTAAATAA
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| Protein sequence | MRSDTIKTGF EKAPHRSLLK ATGSIVSNND FKKPFIGICN SYNELIPGHS HLQELGRIAK
EEVRKAGGVP FEFNTIGVCD GIAMGHIGMR YSLASRELIA DSVETVAQAH CLDGLVCIPN
CDKITPGMMM AALRINIPVI FVSGGPMKAG HTPSGQTVDL ISVFEAVGQF SAGKIGNEEL
ESIEESACPG CGSCSGMFTA NSMNCLSEAL GFALPGNGTI LAIDPRRNEL VREASRRIID
LVKKDIKPRD ILSRNALLNA FALDFAMGGS TNTILHTLAI ANEAELDFNF SELNALSAKT
PYICKVSPAT MAVHIEDVDR AGGVSAILHE LSRIDGLLDL STLTVTGKTL GENIADAEIL
DYTVIRSIDE PYSATGGLAV LFGNLAPQGA VVKTGAVAPE MMKHTGPAKI YDCQDDAIKG
IMGDDVKAGD VVVIRYEGPK GGPGMPEMLS PTSAIMGRGL GESVALITDG RFSGGSRGAC
IGHISPEAAE RGPIAALHNG DLITIDIPSR SISVNLTEET INERLAALKP FEPKIKKGYL
ARYAQMVTSA NTGAILKNPV SCEPK
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