Gene Ppha_2156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2156 
SymboldnaK 
ID6462436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2239316 
End bp2241238 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content47% 
IMG OID642728352 
Productmolecular chaperone DnaK 
Protein accessionYP_002018976 
Protein GI194337182 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAA TTATCGGCAT CGACCTTGGC ACGACGAACT CTTGTGTTTC GGTTATGCAG 
GGATCGCAGC CAACAGTTAT CGAAAATTCA GAGGGAAACC GTACAACACC CTCTATCATA
GCCTTAACCA AAACCGGTGA TCGTTTGGTT GGCCAGGCTG CAAAAAGACA GGCGATAACC
AATCCGAAGA ACACGATCTT TTCTATCAAG CGTTTCATGG GACGCAAATA TGATGAAATC
AATGACGAAA AAAAGCTTGC TCCCTATGAA ATTATCAACG AAGGTGGTGA AGCCCGCGTA
AAAATCAATG ACAAAATCTA TTCTCCCCAG GAAGTTTCAG CAATGATCCT GCAGAAAATG
AAGCAGACGG CTGAGGACTT TCTTGGTGAA AAAGTTACCG AAGCAGTCAT CACGGTGCCG
GCATACTTCA ATGATGCCCA GCGGCAGGCG ACAAAAGATG CCGGGCGTAT TGCCGGACTT
GATGTCAAGC GTATCATCAA TGAACCTACC GCTGCTGCTC TTGCCTACGG CCTTGACAGA
AAGCAGACGA GTGAAAAAGT TGCGGTCTTC GATCTTGGTG GAGGAACATT TGATATCTCC
GTTCTTGAGC TTGGTGATGG TGTTTTTGAG GTGAAGTCAA CTGACGGCGA TACCCATCTC
GGCGGTGACA ACTTTGACCA GAAAATTATC GATTATATTG CTGACGAGTT TAAAAAACAG
GAGGGTATTG ATCTTCGCAA GGATGCCATT ACCCTTCAGC GCTTGAAGGA AGCCGCTGAA
AAAGCAAAAA TCGAACTCTC TTCAAGGACT GATACCGAAA TCAATCTTCC CTTCATTACT
GCAACACAGG AAGGGCCGAA ACACCTGGTG ATCAATCTCA CCCGTGCAAA ATTCGAGGCA
TTGTGCGCTG ATCTGTTCGA CAAGATTCTT GATCCCTGTC GTCGTGCCAT CAAGAATTCC
AAGCTTGAGA TGAAGGAGAT CGACGAGGTG GTTCTTGTTG GAGGTTCCAC CCGTATACCA
AAAGTGCAGG CTTTGGTCAA AGACTTTTTC GGCAAAGAGC CGAACAAAAG TGTCAATCCT
GATGAAGTTG TTGCTATCGG CGCGGCTATT CAGGGTGGTG TTCTGAAAGG TGACGTCACT
GATGTTCTGC TGCTTGATGT AACACCTCTT TCGCTTGGTA TTGAAACCCT TGGCGGTGTA
ATGACGAAGC TCATCGATGC AAACACCACT ATTCCGACAA GAAAGCAGGA GGTTTTTTCA
ACTGCAGGTG ATAATCAGAC CTCGGTTGAG GTACATGTTT TACAGGGAGA GCGCCCAATG
GCTACCGACA ACAAAACACT GGGTCGGTTC CACCTTGGCG ATATTCCTCC CTCTCCAAGA
GGCATACCAC AGATCGAAGT GACGTTTGAT ATCGATTCCA ACGGTATTCT GCATGTTTCA
GCAAAAGACA AGGCAACAGG AAAAGAGCAG AGCATCAAAA TTGAATCGAG CAGCAAGCTC
ACCGACGCTG AAATCAGCAA AATGAAGGAG GACGCAAAAG AACATGCTGC TGAAGATCAG
AAACGCAAGG AAGAGATCGA CACCAGAAAT ATTGCAGACT CCCTGATTTT CAGCACTGAA
AAACAGTTGA AAGAGCTCGG CGATAAAATA CCGGCAGACA AACGTCCCGT ACTGGAAGGT
TCGCTTGAAA AACTCAAGGA AGCTTACAAG AACGGAACCG TTGAGTCTCT TAAAAGTGCG
ATGGAGGAGC TCAACAAGGA GTGGAGTGAG ATTGCCTCTC ATCTCTACCA GTCTCAGGGT
CCGGAATCGT CACAGCCTGA AACGGCAGCA CAGAGTGACA GCGGTGAAAA ATCGAAAAAA
AATAGCGGCG ATGGTAATGT TGAAAATGCT GAATACGAAG TTATTGACGG CAACGACAAA
TAA
 
Protein sequence
MGKIIGIDLG TTNSCVSVMQ GSQPTVIENS EGNRTTPSII ALTKTGDRLV GQAAKRQAIT 
NPKNTIFSIK RFMGRKYDEI NDEKKLAPYE IINEGGEARV KINDKIYSPQ EVSAMILQKM
KQTAEDFLGE KVTEAVITVP AYFNDAQRQA TKDAGRIAGL DVKRIINEPT AAALAYGLDR
KQTSEKVAVF DLGGGTFDIS VLELGDGVFE VKSTDGDTHL GGDNFDQKII DYIADEFKKQ
EGIDLRKDAI TLQRLKEAAE KAKIELSSRT DTEINLPFIT ATQEGPKHLV INLTRAKFEA
LCADLFDKIL DPCRRAIKNS KLEMKEIDEV VLVGGSTRIP KVQALVKDFF GKEPNKSVNP
DEVVAIGAAI QGGVLKGDVT DVLLLDVTPL SLGIETLGGV MTKLIDANTT IPTRKQEVFS
TAGDNQTSVE VHVLQGERPM ATDNKTLGRF HLGDIPPSPR GIPQIEVTFD IDSNGILHVS
AKDKATGKEQ SIKIESSSKL TDAEISKMKE DAKEHAAEDQ KRKEEIDTRN IADSLIFSTE
KQLKELGDKI PADKRPVLEG SLEKLKEAYK NGTVESLKSA MEELNKEWSE IASHLYQSQG
PESSQPETAA QSDSGEKSKK NSGDGNVENA EYEVIDGNDK