Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2156 |
Symbol | dnaK |
ID | 6462436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2239316 |
End bp | 2241238 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642728352 |
Product | molecular chaperone DnaK |
Protein accession | YP_002018976 |
Protein GI | 194337182 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTAAAA TTATCGGCAT CGACCTTGGC ACGACGAACT CTTGTGTTTC GGTTATGCAG GGATCGCAGC CAACAGTTAT CGAAAATTCA GAGGGAAACC GTACAACACC CTCTATCATA GCCTTAACCA AAACCGGTGA TCGTTTGGTT GGCCAGGCTG CAAAAAGACA GGCGATAACC AATCCGAAGA ACACGATCTT TTCTATCAAG CGTTTCATGG GACGCAAATA TGATGAAATC AATGACGAAA AAAAGCTTGC TCCCTATGAA ATTATCAACG AAGGTGGTGA AGCCCGCGTA AAAATCAATG ACAAAATCTA TTCTCCCCAG GAAGTTTCAG CAATGATCCT GCAGAAAATG AAGCAGACGG CTGAGGACTT TCTTGGTGAA AAAGTTACCG AAGCAGTCAT CACGGTGCCG GCATACTTCA ATGATGCCCA GCGGCAGGCG ACAAAAGATG CCGGGCGTAT TGCCGGACTT GATGTCAAGC GTATCATCAA TGAACCTACC GCTGCTGCTC TTGCCTACGG CCTTGACAGA AAGCAGACGA GTGAAAAAGT TGCGGTCTTC GATCTTGGTG GAGGAACATT TGATATCTCC GTTCTTGAGC TTGGTGATGG TGTTTTTGAG GTGAAGTCAA CTGACGGCGA TACCCATCTC GGCGGTGACA ACTTTGACCA GAAAATTATC GATTATATTG CTGACGAGTT TAAAAAACAG GAGGGTATTG ATCTTCGCAA GGATGCCATT ACCCTTCAGC GCTTGAAGGA AGCCGCTGAA AAAGCAAAAA TCGAACTCTC TTCAAGGACT GATACCGAAA TCAATCTTCC CTTCATTACT GCAACACAGG AAGGGCCGAA ACACCTGGTG ATCAATCTCA CCCGTGCAAA ATTCGAGGCA TTGTGCGCTG ATCTGTTCGA CAAGATTCTT GATCCCTGTC GTCGTGCCAT CAAGAATTCC AAGCTTGAGA TGAAGGAGAT CGACGAGGTG GTTCTTGTTG GAGGTTCCAC CCGTATACCA AAAGTGCAGG CTTTGGTCAA AGACTTTTTC GGCAAAGAGC CGAACAAAAG TGTCAATCCT GATGAAGTTG TTGCTATCGG CGCGGCTATT CAGGGTGGTG TTCTGAAAGG TGACGTCACT GATGTTCTGC TGCTTGATGT AACACCTCTT TCGCTTGGTA TTGAAACCCT TGGCGGTGTA ATGACGAAGC TCATCGATGC AAACACCACT ATTCCGACAA GAAAGCAGGA GGTTTTTTCA ACTGCAGGTG ATAATCAGAC CTCGGTTGAG GTACATGTTT TACAGGGAGA GCGCCCAATG GCTACCGACA ACAAAACACT GGGTCGGTTC CACCTTGGCG ATATTCCTCC CTCTCCAAGA GGCATACCAC AGATCGAAGT GACGTTTGAT ATCGATTCCA ACGGTATTCT GCATGTTTCA GCAAAAGACA AGGCAACAGG AAAAGAGCAG AGCATCAAAA TTGAATCGAG CAGCAAGCTC ACCGACGCTG AAATCAGCAA AATGAAGGAG GACGCAAAAG AACATGCTGC TGAAGATCAG AAACGCAAGG AAGAGATCGA CACCAGAAAT ATTGCAGACT CCCTGATTTT CAGCACTGAA AAACAGTTGA AAGAGCTCGG CGATAAAATA CCGGCAGACA AACGTCCCGT ACTGGAAGGT TCGCTTGAAA AACTCAAGGA AGCTTACAAG AACGGAACCG TTGAGTCTCT TAAAAGTGCG ATGGAGGAGC TCAACAAGGA GTGGAGTGAG ATTGCCTCTC ATCTCTACCA GTCTCAGGGT CCGGAATCGT CACAGCCTGA AACGGCAGCA CAGAGTGACA GCGGTGAAAA ATCGAAAAAA AATAGCGGCG ATGGTAATGT TGAAAATGCT GAATACGAAG TTATTGACGG CAACGACAAA TAA
|
Protein sequence | MGKIIGIDLG TTNSCVSVMQ GSQPTVIENS EGNRTTPSII ALTKTGDRLV GQAAKRQAIT NPKNTIFSIK RFMGRKYDEI NDEKKLAPYE IINEGGEARV KINDKIYSPQ EVSAMILQKM KQTAEDFLGE KVTEAVITVP AYFNDAQRQA TKDAGRIAGL DVKRIINEPT AAALAYGLDR KQTSEKVAVF DLGGGTFDIS VLELGDGVFE VKSTDGDTHL GGDNFDQKII DYIADEFKKQ EGIDLRKDAI TLQRLKEAAE KAKIELSSRT DTEINLPFIT ATQEGPKHLV INLTRAKFEA LCADLFDKIL DPCRRAIKNS KLEMKEIDEV VLVGGSTRIP KVQALVKDFF GKEPNKSVNP DEVVAIGAAI QGGVLKGDVT DVLLLDVTPL SLGIETLGGV MTKLIDANTT IPTRKQEVFS TAGDNQTSVE VHVLQGERPM ATDNKTLGRF HLGDIPPSPR GIPQIEVTFD IDSNGILHVS AKDKATGKEQ SIKIESSSKL TDAEISKMKE DAKEHAAEDQ KRKEEIDTRN IADSLIFSTE KQLKELGDKI PADKRPVLEG SLEKLKEAYK NGTVESLKSA MEELNKEWSE IASHLYQSQG PESSQPETAA QSDSGEKSKK NSGDGNVENA EYEVIDGNDK
|
| |