| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2152 |
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| Symbol | |
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| ID | 6462457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2237129 |
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| End bp | 2237758 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642728348 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_002018972 |
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| Protein GI | 194337178 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAAC CTGATCCTGC TCGCGACTTA AAAACCGGGA CAAAAAAAGA GACGCTCTCC
CGAGATGAGC GACGAAAGCA ACTTGAGTTT CAAAATGAAG CCGTTGTTCA TCTTAACGCC
CTCTATAACT ATGCTCTTCA CTTGACCATG AATCCAAGTG ATGCTGAGGA TCTGGTGCAG
GAGACCTATC TGAAGGCATA TAGATTTTTT AATTCTTTTG AGCGGGGAAC AAACTGTAAG
GCATGGCTGT TTAAAATCCT GAAAAACAAC TATATCAACC GCTTCAGGAA AAATTCGAAG
GAACCTGGAA AAGTTGATTA TGATCTTATT AAAGATTTTT ATCATTCAAT CAAAGACACC
CGAAGTGATA CCACTGAGTC AGAAAGCGAT TATTTCCATT CATTGCTGCA CGAAGAGGTC
TATCAGGCGC TTCACTCTCT GCCCGAGGAG TTCAGGGAGG TGATTCAGTT GTGTGATATT
GAGGGATTTA CCTATGAGGA AATTGCAAAT ATGGTAGAAA GCCCTATCGG AACGGTGAGG
TCAAGGTTAT ATCGGGGCAG GAAGCTGCTT CGCAGTCAGC TTGAGGGATA TGCAAAGAAA
TACGGCTTCA ACACCGATAA CGTTCAATAA
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| Protein sequence | MDKPDPARDL KTGTKKETLS RDERRKQLEF QNEAVVHLNA LYNYALHLTM NPSDAEDLVQ
ETYLKAYRFF NSFERGTNCK AWLFKILKNN YINRFRKNSK EPGKVDYDLI KDFYHSIKDT
RSDTTESESD YFHSLLHEEV YQALHSLPEE FREVIQLCDI EGFTYEEIAN MVESPIGTVR
SRLYRGRKLL RSQLEGYAKK YGFNTDNVQ
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