Gene Ppha_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2091 
SymbolpheT 
ID6462770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2175670 
End bp2178081 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content51% 
IMG OID642728286 
Productphenylalanyl-tRNA synthetase subunit beta 
Protein accessionYP_002018915 
Protein GI194337121 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0072] Phenylalanyl-tRNA synthetase beta subunit 
TIGRFAM ID[TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00819338 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT CTGTCAGTTG GCTCAAAGGT TTTCTTCCCT CCTTTTCTTC CGATACGCTG 
TCACTTGTTG AAAAACTGAC CTTTCTCGGC TTTGAGGTGG AGGAGGTTCA GGAGCCCTCC
CTTCCAGATG ATCTTGTTGT TGTGGGACGA ATAGAAGAGG TGGTGCAGCA TCCCAATGCT
GAACGCCTGA CTATTTGCCG GGTTGATGTC GGTCGTGAAG AGCCTCTTCA GATTGTGTGC
GGCGCTCCGA ATGTCAAAGC AGGAATGGTT GTTCCTGTAG CGACACTCAA AGCAAAACTG
ACCGCTTCTG ATGGCCAGAC CATCACCATC AAGCCCTCGA AAATACGCGG TGAACGCTCG
TTCGGCATGA TTTGTGCCGC TGACGAACTT GGGCTCTCTG ATGACCATTC AGGCGTTATG
GAGCTTGACT CTTCATGCCG GATCGGTGAG CCTGTAGCCC GTTATTTTGA TGGCGATGTC
GTGCTTGATA TTGCCGTGAC ACCAAACAGG CCCGACGTTC TCTCCCATCT CGGAATAGCA
CGGGAGCTTG CAGGAGGTGA AGAGATACAC TATCCGGAAC AGAACGCAGT ACCATTTGTA
CAAACTGGGA CGCTTGTTGA TGTTCTGGAT GCTGTCGCCT GCCCCTATTA CACGGGTGTG
GTCATAAGAG GGATAACGGT TGCCGAGTCT CCTGCATGGC TTCGAAAAAA GCTTGAAAGT
ATTGGTTTGA GGCCGAAAAA CAACATCGTT GATATCACCA ACTATATTCT TCACGGGTTG
GGCCAGCCCC TTCATGCCTT CGATCTTCAA AAGCTTGCCG GTGAGCGGGT TGTAGTGCGG
AGTGATGTGC GTGGGGAATT TGTTGCCATC AATCAGCAAT CCTTCCAGGT TGAGCCCGGT
ATGCCGGTTA TCTGTGACAG CCAGAAGCCA GTGGCTCTTG CCGGCGTTAT GGGAGGACTT
GAGTCAGCCG TAAGTGACGC CACAACCGAT ATTCTGCTTG AGTCAGCCTG GTTTGATCCC
TCTATGATCC GGAAATCGGC AAAAAAAGCT GCGATCTCTT CGGATGCCTC ATACCGTTAC
GAGCGGGGTA TCGACCCCCG GAATGTCAGA CGGTCGGCAG AGTGCGCCGT AGCATTGATT
CTGGAGCTTG CCGGAGGCCG TATTGAAGAG GCTCAGGAGT GGGGTTCAGT GCCGGCTGAA
TTGCGTCGCG TAGCCCTGAG AGCTGATCGG GTCAACGCCT TGCTTGGCAG TTCGATAGCC
GCAGGCGAAA TGGTGGCGAT GCTCCAGCGG ATTGGATTCA GGACTGACGA AACCGAAGGG
GAATCAATCA CCTTCGAGGT GCCTTCCTGC AGGGTCGATG TTTCAGGGGA GATCGATCTT
GTCGAGGAGA TTGCCCGCCT CTATGGTTAC GACAATATTC AGCCTTCTGC CCAGATGGCG
ACCATCTATC CACAGTCGCG CAAGTTCCCG GAGTTTTTCC CGGATTTTCT CCGCTCTCTC
ATGGTCGGCT TGCATTTCCG CGAAATTCTC ACCAATCCGC TTGTGAAAAG AGAAGAGGCC
GCTCTGTTCA GCGACAAGCT TGTTGGTGTG CTTAATCCTA TCAGTGAGGG GCTTGAAGTA
CTTCGTCCCG CGCTTGTTCC CGGATTTCTG AAGGTTATAA GCCATAATAT CAGGCATGGA
AACCGGGATC TTCAACTCTT TGAGGTAGCC AGGGGATTTC AAAGTCTCGC AGCAGGTGAG
TGCAGGAGTG AGTCGCCGCT TGATGCTTAC AGTGAACAGG AATATCTTGT TCTTGCCATC
ACTGGCAGTC GTTTCCCGAG AATCTGGAAC CAGTCGTCAG AAAAGGTTGA TTTTTACGAT
CTTATGGGCG CTGTCGAGAT GCTGCTCGAG AAGCTGAATT TGCTTGATAA ATCAGTGGTG
AATATTTATA ATGAAAACAC TGTCAGCATT GATGTACAGT TGACAGAAAA GGGAAGAAGT
TGCTCGTACA GGGCAGGTGT TGTACAGCGA CTCGATTCAA ACCTCTTGGG CAAATTTGAT
ATTGGACAGG ATGTTTATAT AGCGGAACTT GACGCGGCAG CTCTCGAAAG CTGTTTCAGT
TCAGGTGTCA CCTATGAGCC GCCTTCCAGA TTTCCGGTTG TTCAGAGGGA TATATCGCTT
GTTCTGCCTC CTGATGTTAC TGTTCAGTCA CTTGTTGAAT TGGTTCGTTC AAGTGACTCC
CTGATCAGGG GTGTCTCTGT TTTTGATCTT TTCGAGCGTA CCCGTGAGGA TGGCGGAGAG
CGTAGCGTTG CACTCTCTCT TGAAATTGCA GATCATGCAG GGACGCTACA GGATGAAAGA
ATCAGCGATA TTCTTTCTAA AGTCGGCAGT AATGCCGCGA GTAAGCTTGG TGCGGTTATT
CGACAAGTCT GA
 
Protein sequence
MKISVSWLKG FLPSFSSDTL SLVEKLTFLG FEVEEVQEPS LPDDLVVVGR IEEVVQHPNA 
ERLTICRVDV GREEPLQIVC GAPNVKAGMV VPVATLKAKL TASDGQTITI KPSKIRGERS
FGMICAADEL GLSDDHSGVM ELDSSCRIGE PVARYFDGDV VLDIAVTPNR PDVLSHLGIA
RELAGGEEIH YPEQNAVPFV QTGTLVDVLD AVACPYYTGV VIRGITVAES PAWLRKKLES
IGLRPKNNIV DITNYILHGL GQPLHAFDLQ KLAGERVVVR SDVRGEFVAI NQQSFQVEPG
MPVICDSQKP VALAGVMGGL ESAVSDATTD ILLESAWFDP SMIRKSAKKA AISSDASYRY
ERGIDPRNVR RSAECAVALI LELAGGRIEE AQEWGSVPAE LRRVALRADR VNALLGSSIA
AGEMVAMLQR IGFRTDETEG ESITFEVPSC RVDVSGEIDL VEEIARLYGY DNIQPSAQMA
TIYPQSRKFP EFFPDFLRSL MVGLHFREIL TNPLVKREEA ALFSDKLVGV LNPISEGLEV
LRPALVPGFL KVISHNIRHG NRDLQLFEVA RGFQSLAAGE CRSESPLDAY SEQEYLVLAI
TGSRFPRIWN QSSEKVDFYD LMGAVEMLLE KLNLLDKSVV NIYNENTVSI DVQLTEKGRS
CSYRAGVVQR LDSNLLGKFD IGQDVYIAEL DAAALESCFS SGVTYEPPSR FPVVQRDISL
VLPPDVTVQS LVELVRSSDS LIRGVSVFDL FERTREDGGE RSVALSLEIA DHAGTLQDER
ISDILSKVGS NAASKLGAVI RQV