Gene Ppha_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2083 
Symbol 
ID6462793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp2170243 
End bp2170920 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content58% 
IMG OID642728277 
Producthypothetical protein 
Protein accessionYP_002018907 
Protein GI194337113 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000109984 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA CCCCCCTTCT CGCCATGCTT CTCTCCGGTC TTGCCGGAGG ATTCGGTCAC 
TGCATCAGTA TGTGCGGCCC GGTTGTTGCC GCCTTCAGCG TTGGTGAAAC CCGTAAAGGG 
ATACTCCACC ACCTGCTCTA CAACCTCGGA CGCATCACCA CCTACACCAT CCTCGGCGCT 
GTGGCTGGCC TCTCAGGCTC ATTTCTGCTC CTTACCGCCT CCATCGAGCC TCTCCAACGC 
GCCATCATGA TCATTGCTGG TCTCTCCATC ATCCTCATGG GGCTCTCCAC AGCAGAGTGG 
CTGCCACTAC CGAAACAATT CACCAGTTGC TCAACCGGCG TTTCAGTAAT TCAGCGCATC 
ATGGCCCTCT TCAAAGCCCC ACGCTCCGTC GGCGCCTACT ACCCGATGGG CATCGTCCTC 
GGCTTTCTCC CCTGCGGCCT CACCTATACC GCCCTGCTCG CCGCTGCACG AGCCGCCATG 
GAGGCAGAGA ACCCCTTTGC CGGAATGATG CAGGGCGCCC TGATGATGAT GCTCTTCGGC 
ATCGGCACTG CACCAGCGCT GATTCTTGTC GGGAAAGTGG TGAACAGCAT CAGCAACAAA 
ACTCGAAAAT GGTTTTACCG GGTGGCCAGC CTGATTATGA TTGCTACGGG TGTGTGGTTT 
GTGGTGTCGG GGTGGTGA
 
Protein sequence
MTITPLLAML LSGLAGGFGH CISMCGPVVA AFSVGETRKG ILHHLLYNLG RITTYTILGA 
VAGLSGSFLL LTASIEPLQR AIMIIAGLSI ILMGLSTAEW LPLPKQFTSC STGVSVIQRI 
MALFKAPRSV GAYYPMGIVL GFLPCGLTYT ALLAAARAAM EAENPFAGMM QGALMMMLFG 
IGTAPALILV GKVVNSISNK TRKWFYRVAS LIMIATGVWF VVSGW