Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2082 |
Symbol | |
ID | 6462794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2170055 |
End bp | 2170246 |
Gene Length | 192 bp |
Protein Length | 63 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642728276 |
Product | cytochrome oxidase maturation protein, cbb3-type |
Protein accession | YP_002018906 |
Protein GI | 194337112 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3197] Uncharacterized protein, possibly involved in nitrogen fixation |
TIGRFAM ID | [TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000292498 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGCAA CATTTTTTTT GATCGGCATT GGTCTTTTTG TCGGAGTCGC CGCATGGTTT CTCTTCATCT GGGCCGTAAA AAGCGGCCAG TTCGACGACC CCGAAGCTCC CAAATACCGG ATGCTTGACG ATGATGACGA ACTGGCAAAC CCCTTGAAAC CTGCAAAGCC TGCAAAGAAA AAAAACCCAT GA
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Protein sequence | MYATFFLIGI GLFVGVAAWF LFIWAVKSGQ FDDPEAPKYR MLDDDDELAN PLKPAKPAKK KNP
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