Gene Ppha_2069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2069 
Symbol 
ID6462815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand+ 
Start bp2158693 
End bp2159385 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content48% 
IMG OID642728263 
ProductTPR repeat 
Protein accessionYP_002018893 
Protein GI194337099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA TACAATCCAG CACTCCCGTC CAGCAGGGCG TCAAACCATC TACAGAAGAC 
AATCTTCTTT ACATTGCCAT CAAATATAAA GTTGCAATTA TCAGTACACT GGTACTCCTC 
GCAGCTCTCG GAGCCGGAGC CTTCTTCTGG GTGCGCTACC AGCAAAGCAA TGAACTGGAT 
GCTGCACTGC AACTCTCAAG AATAGCTCCA CTTCTTGACC GTGGAGAGTT CAAGGCTGCC 
ATCAACGGTA CCGATAAAAC TGCCGGATTG AAGAAAATTG CTGATGACTA TGCCGGAAAA 
TATATGGGGA CTCCAAGTGG AAATATGGCC AATCTGCTGC TCGCTAATGC GCTCTACTCC 
ATGGGAAATT TTGACGCAGC TCTTGAGGTC TTTAAGAGCG TATCCATCAA TAATGATGAT 
CTTGCTGCCG CTGCCCTTGC TGGCGCCGGG GACTGCTACG TCAATAAAAA TCAGTTAGCA 
TTGGCCGCAG AGAGCTATCA GGATGCATCA TCCAAGGCTG AAAGCAAACC GCTTAAAGCG 
CAATACCTCG CACATGCAGC CAACAGTTTC CAGCAGATAA ACCAGCTTAA AAAAGCATCA 
GAGCTGTATA CAAAAATCAT AGCAGACTAT CCAGGAACAA CCGCAGCAGC CGTAGCTCAA 
CGGTCGCTCT GGCAGCTTCC CTCAAATCTT TAA
 
Protein sequence
MNDIQSSTPV QQGVKPSTED NLLYIAIKYK VAIISTLVLL AALGAGAFFW VRYQQSNELD 
AALQLSRIAP LLDRGEFKAA INGTDKTAGL KKIADDYAGK YMGTPSGNMA NLLLANALYS 
MGNFDAALEV FKSVSINNDD LAAAALAGAG DCYVNKNQLA LAAESYQDAS SKAESKPLKA 
QYLAHAANSF QQINQLKKAS ELYTKIIADY PGTTAAAVAQ RSLWQLPSNL