| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2059 |
|---|
| Symbol | |
|---|
| ID | 6462827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2149147 |
|---|
| End bp | 2150250 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642728253 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002018883 |
|---|
| Protein GI | 194337089 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000122607 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TGCTATCACT TGCTGCAATG TTTGCAGTAC TGTCTTATGC ATCACCGGCA
TCAGCCGAAC TGAAAATTGG TGGCGACGCT GCTGTACGTC TGAGAAGCGA GTTCACCGAT
ACAGAAACAA ACAATGTCAA GACATCGAAC ACTGATGAAC TCAAGCTCCA GTACAGAATC
CGCCTGAAAG CATCTGCTGA CCTCGGTAGC GGCTACTTCT TTAAAACAAT GATTCAGAAC
GAGTCGAATC CTGGCAGTTG GGTAACCGTA GCCGGTAATC CTGGTAATAA TGATGAACAT
TATGCTCTTG AAGTATCCAA CTTCTACTTC GGACGTGTGA TGGAATGCAG CCACTACCAG
ATTGGCCGTC TTCCGCTGAA CAGTGTCAAC AACCCAATTT TTGACCTGAC CCTTGTACCA
ATCCCTGCTG GTAACATCTA TGCTGTGGAT ATCCCGGTAG CTACTTATAG TTTTGATCGC
GTTTTTGGTC TTAACTATGG CACGAAAGTA GGAAATGGTG ACCTGAATGC CACACTCGTT
GTGCTTGATA ATGACATCAC TTTAGGTGAC ACTGCAGCAG AAGGCGATGG CATCTTCAAT
GATGGTTATG CATTGCATCT TGCATACAAG ACTTCCATTG GAGATGTTAC TCTGGAACCA
CAGGCTCTCA TTGCCTTGAC CGATGTCGAT GGCGGAGCTT ATCAGAATGT ATCACCGAAC
ACCTTTGGTG CAAATGTGAC CATTCCTGCA GGCAAATCAA AAATAGGCAT GAGTGGCTTC
TACACGGTCT GCGATGACAC AAACCCGAAC ACAAATGCCA AAGTTGACTA CAACGGCTAC
CTTCTCAGAC TCAAAGGTGA GTCTGGACCA GTTATGGCCT GGGTTGACTA CAACCACACC
AACGACAACT CACCAGTTAC TGATGTTGAC TACGACAACC TCTTCGTCTG GGCACAGTAC
AACTTCAAGG TACACGAATC AGCGATGGGC TCTTTCAGCC TGACACCGAC TATCCGCTAC
CGTGCTTCAG GTAAGGATAA CGGCTTAACA GAGACTGACA ACAACCAGCT TCGTGGTGAA
CTCTATGCAA CAGTGACCTT CTAA
|
|---|
| Protein sequence | MKKMLSLAAM FAVLSYASPA SAELKIGGDA AVRLRSEFTD TETNNVKTSN TDELKLQYRI
RLKASADLGS GYFFKTMIQN ESNPGSWVTV AGNPGNNDEH YALEVSNFYF GRVMECSHYQ
IGRLPLNSVN NPIFDLTLVP IPAGNIYAVD IPVATYSFDR VFGLNYGTKV GNGDLNATLV
VLDNDITLGD TAAEGDGIFN DGYALHLAYK TSIGDVTLEP QALIALTDVD GGAYQNVSPN
TFGANVTIPA GKSKIGMSGF YTVCDDTNPN TNAKVDYNGY LLRLKGESGP VMAWVDYNHT
NDNSPVTDVD YDNLFVWAQY NFKVHESAMG SFSLTPTIRY RASGKDNGLT ETDNNQLRGE
LYATVTF
|
|---|
| |