| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2052 |
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| Symbol | |
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| ID | 6462837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2144882 |
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| End bp | 2145691 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642728246 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_002018876 |
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| Protein GI | 194337082 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.858375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGATA CCTGCGGATG TTCAACTGAC GAAGGGGCTG TGCTCCGTAA ACCCGGCCAG
AGTGATTATC ATGTTCATGT CAGTGACCAC GATCATAGCC ACACGCATGA GGAGCATCAC
AGCCATGATC ATGGCCATCA TCATCATGAA GGCACAAGCC GGAAGGTTGT TCTTGAACAG
GATGTGCTTC AGAAAAACAA TCTTCTCGCT GAAAGAAACC GGGGATATTT TGAGGCAAAA
AAGATTTTTG CGCTTAATTT TTTGAGTTCC CCTGGTTCAG GCAAAACGTC ACTGCTTGAA
AAAATTATTC CGGTACTGCA ACAGCGCTTT CCGGTTGCAG TCATAGAGGG CGACCAGCAA
ACTACCAATG ATGCCGAGCG AATTCAGGCT CTCGGTGTGC CGGTAATCCA GATCAACACC
GGTTCGGGAT GTCATCTTGA TGCCTTGATG GTCAACCGTG CTGTAAAGGA GCTTGACCTG
CAGGATAATT CGCTGCTTTG TATTGAAAAT GTCGGAAATC TTGTCTGTCC GGCGCTCTTT
GATCTCGGTG AAGCACTCAA GGTTGTCATT ATCAGTGTGA CGGAGGGAGA CGACAAGCCG
TTGAAGTATC CAACCATGTT TCATGAGGCC GATCTCTGCA TTCTCAACAA GATCGATCTT
CTTCCCTATG TGGAATTTGA TGTTGCCAGA TGCCGTGAAA ATGCCATGCG GGTCAACCAC
CATCTCGAAT GGTTTGAACT TTCAGCAAAA ACAGGAGAGG GGCTGACTGT ATGGCAGGAG
TGGCTCGAAA AGAAACTGTT ACAGCACTGA
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| Protein sequence | MCDTCGCSTD EGAVLRKPGQ SDYHVHVSDH DHSHTHEEHH SHDHGHHHHE GTSRKVVLEQ
DVLQKNNLLA ERNRGYFEAK KIFALNFLSS PGSGKTSLLE KIIPVLQQRF PVAVIEGDQQ
TTNDAERIQA LGVPVIQINT GSGCHLDALM VNRAVKELDL QDNSLLCIEN VGNLVCPALF
DLGEALKVVI ISVTEGDDKP LKYPTMFHEA DLCILNKIDL LPYVEFDVAR CRENAMRVNH
HLEWFELSAK TGEGLTVWQE WLEKKLLQH
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