| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2051 |
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| Symbol | |
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| ID | 6462838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2142372 |
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| End bp | 2144921 |
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| Gene Length | 2550 bp |
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| Protein Length | 849 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642728245 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_002018875 |
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| Protein GI | 194337081 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAG TGGCTCGAAA AGAAACTGTT ACAGCACTGA GCATCAAGGA GAGCAGCGCT
GAAGAGCGGA GGCGTCTTCG GGTCAACGGT ATGGTACAGG GTGTGGGGTT CCGCCCTTTT
GTTTACCGTC TGGCTGTTGC TTGTGACCTG AAAGGGTTTA TCTGCAATAC AGCCTCTGGT
GTGCTGATTG AGGTGCAGGG TCAACTCTCG CTTCTCAATG AGTTTTCGCG TCGTTTGCTG
GGGGAGCGCC CGCCGCTTGC GTTCATCGAA ACCATCGAAG AGATGTCTCT TCCCTGTGTT
TCAGAAGAGG CTTTTCTGAT CGGGAATTCG GGTTCCGGCG TTGGGGTCGA AACACTCATT
CCGCCCGATA TTGCGCTTTG CAGTGATTGC CGACGAGAGC TTCTGGATCC TGCCAATCGC
CGGTTTCGTT ATCCTTTCAT CAACTGTACC AATTGCGGTC CCCGCTATAC CATTGTCGAT
CGGTTGCCCT ACGACCGTCC ATTTACCTCC ATGCATGGGT TTACCATGTG TGAAGCGTGT
GAGCGCGAGT ATCATGACCC GCTTGATCGT CGGTTTCACG CACAGCCCAA TGCCTGTCCG
GTTTGCGGCC CCACTCTTTC CTTGTTTGAT GCTTCAGGTA CGCTCCTTTT GGGGGAGAGT
GTCGTGGAGC ACAACCCGGT CGATGGCACT TCTCATGCAC AGCCAAAAAC CGCTTTGTCC
TGTGCTCACA CCCTGTCCGG TGATGTCGTC GCCGAAGCCG TTGCTTTTCT CAGGAGAGGG
ATGATTGTTG CGCTGAAAGG GCTTGGCGGT TTTCATCTTG CCGTAGACGC ACGAAATGAA
GCTGCGGTAC GGCGACTTCG GGAGCGGAAA GGTCGAGAGG CAAAACCTTT TGCAGTGATG
ATACGCGACA GGTCGCTTGT TCACGGCTAT TGTGAGGTCA GTGAAACGGA AATGGCCGCA
CTGAGCGCTG CGCAAGCCCC CATTGTGCTT CTGAAAAAGA AAAAGAGCAG CAACCTTGCG
CCATCCATAG CGCCAGGCAA TGAGCGCCTT GGCGTCATGC TGCCCTACAC GCCACTGCAC
ACCCTGCTTT TCGATGAAAC TCTCGACATT CTGGTGATGA CCAGTGCCAA TTTCAGCGAG
GAGCCAATTG CAAGTGAGAA TGAGGAAGCG CTTCTGCGTC TCAAGGGTAT TGCCGATGCT
TTTCTCGTGC ATAACCGCCC CATCTACCTG AAATGCGATG ATTCGGTCAC CATCGCTTTA
TCGGGAACGT TGCGGCAGCT CAGGCGGAGC AGGGGATATG TTCCGGCGCC AATATATCTT
CGCGAAGATG GTCCGGTTGT TCTTGCTGCC GGAGGTGAGC TGAAAAATAC CATTACGATT
CTGAAGGGTA GTCATGCACT GATGAGCCAG CATATTGGTG ACATGAAAAA CTATGAAGCA
TACCGCCATT TTGTGCAGGT TGTTGCCCAT CTTCAGCATC TTTTTCAGGC TGTACCCAAG
CTTCTGGTGC ACGATCTGCA TCCTGCCTAC ATGACAACAC AGTGGGCGAT GATGCAGAAT
ATTCCCTTGC TTGGTGTCCA GCATCATCAT GCTCATCTGG TGTCATGCCT CGCTGAAAAC
AGGGAGGAGG GGCCAGCGAT TGGGCTCATA CTTGATGGTA CAGGATATGG AACTGATGGC
ACGATCTGGG GTGGAGAGGT ACTGATTGGG GATGCTGCCG GAGCAGCACG CTTTGCTTCA
CTTGAGCTTA TGCCATTGCC GGGAGGGGAG GCCGCAGTCA TGCACCCCTG GCGGGCTGCG
CTTGGCTATC TTCACCGAAG TTGTCCCGAC CTGCCCGACC TTCCCTTCAT GAAAGGACGG
AGCATTGAGC CGGTTCTTGA GTTACTTCAA AAGAGGGTTA CTATTGTTGA AACCTCAAGC
TGTGGCCGAC TTTTTGACGC CGTTGCCGCA CTCTGCGCTC TGCGGGGTGA GATCAGCTAT
GAGGGAGAGG CCGCCATTGC ACTGATGCAT GAGGCAGGGG GGAGTATGGG CAGCAAGTCG
TTCCGCTACG GGCTGCATTA TGAGCAAAAG CCTGCACTTG CGCCAGTGCA ATCCGCAGGA
GGTACCATAG GCACGAACGA TATACCGGCA GTTACAGAGA GGCTGATCAA TACCCCGCGA
GGAACTATCG CGAACAAGCA CGATCTGTTG CATGAGGAAA AAGGGCGCTG GACGATGCTG
GTTTCGCCAA TTATCCGTGA TGTTGTCACT GCCCTGCAAA CAGGGATGGC TGCCGGTGAA
ATCAGCCGGC GCTTTCACCG TACGCTTGTA AACTGTTTTT ATGAAATTAT CGGGAAGGCA
TCCAAAGCGA CAGGCATAAC CACCGTAGCG CTCAGTGGAG GAGTTTTTCA GAACGCCCTC
CTCTTTGAAG CCCTCGTGAC TGAACTGCAA CGTGCAGGCT ACAAGGTGCT TACCCAAGCC
CTTGTGCCCT CCAACGACGG AGGCCTCTCC CTTGGCCAGG CCCTCATTGG CAGAACTTAC
CTCAACGGCA ACTATCAAGG AATCCAATAG
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| Protein sequence | MAGVARKETV TALSIKESSA EERRRLRVNG MVQGVGFRPF VYRLAVACDL KGFICNTASG
VLIEVQGQLS LLNEFSRRLL GERPPLAFIE TIEEMSLPCV SEEAFLIGNS GSGVGVETLI
PPDIALCSDC RRELLDPANR RFRYPFINCT NCGPRYTIVD RLPYDRPFTS MHGFTMCEAC
EREYHDPLDR RFHAQPNACP VCGPTLSLFD ASGTLLLGES VVEHNPVDGT SHAQPKTALS
CAHTLSGDVV AEAVAFLRRG MIVALKGLGG FHLAVDARNE AAVRRLRERK GREAKPFAVM
IRDRSLVHGY CEVSETEMAA LSAAQAPIVL LKKKKSSNLA PSIAPGNERL GVMLPYTPLH
TLLFDETLDI LVMTSANFSE EPIASENEEA LLRLKGIADA FLVHNRPIYL KCDDSVTIAL
SGTLRQLRRS RGYVPAPIYL REDGPVVLAA GGELKNTITI LKGSHALMSQ HIGDMKNYEA
YRHFVQVVAH LQHLFQAVPK LLVHDLHPAY MTTQWAMMQN IPLLGVQHHH AHLVSCLAEN
REEGPAIGLI LDGTGYGTDG TIWGGEVLIG DAAGAARFAS LELMPLPGGE AAVMHPWRAA
LGYLHRSCPD LPDLPFMKGR SIEPVLELLQ KRVTIVETSS CGRLFDAVAA LCALRGEISY
EGEAAIALMH EAGGSMGSKS FRYGLHYEQK PALAPVQSAG GTIGTNDIPA VTERLINTPR
GTIANKHDLL HEEKGRWTML VSPIIRDVVT ALQTGMAAGE ISRRFHRTLV NCFYEIIGKA
SKATGITTVA LSGGVFQNAL LFEALVTELQ RAGYKVLTQA LVPSNDGGLS LGQALIGRTY
LNGNYQGIQ
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