| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2049 |
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| Symbol | |
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| ID | 6462842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2140903 |
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| End bp | 2141997 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642728243 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_002018873 |
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| Protein GI | 194337079 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA TCGATGAATA TCGCGATCCA CAGCTTGCCC GGAAGCTGCT TGACGAGATT
CGCAGAAAAA CCACCCGCCA CTGGACCATC ATGGAGATCT GCGGTGGACA AACCCATTCG
ATTATCCGCA ACGGCATCGA TCAACTGCTG CCAGATACCA TCGAACTGGT GCATGGCCCC
GGTTGCCCGG TCTGTGTAAC ACCGCTTGAA TCGATTGAGC GGGCTCTTCT TATAGCGGCA
AGAAAAGAGG TGATCTTCAC CAGTTTCGGC GATATGCTGC GCGTGCCTGG CAGTTCAAAA
GATCTCTTTA TGGTGCGCAG TGAAGGGGGC GATGTGCGCA TTCTCTTTTC CCCGCTTGAT
GCCCTCCAGA TTGCTCGTGA CAATCCCTCA AAAGAGGTGG TCTTCTTTGC CGTTGGATTT
GAAACTACTG CGCCAGCCAA CGCCATGGCA GTCTGGCAGG CAGCGCGAGA AGGAATTGAA
AATTTCAGCG TGCTGGTCAG CCAGGTCATG GTGCCGCCAG CCATGCGAGC CATTCTTTCA
TCTCCCGAAA ACAGGGTTCA GGGCTTTCTT GCAGCAGGGC ACGTTTGCGC AGTCATGGGC
TACGAGGAAT ATGAGCCAGT CGCCCGTGAG TTTCATGTGC CGATAGTGCC GACCGGTTTT
GAGCCGGTTG ACCTCCTTGC CGGAATACTG AAAACGGTCG AACTGCTTGA AGAGGGGCGT
GCAGAGGTTG TGAACCGCTA CGGACGGGTG GTGAGTCGTG AAGGGAACCG TGTGGCGCAA
GGGATTATCA GCCAGGTCTT TGAAGTAACC GACCGGCAGT GGCGGGGGAT TGGCCTTATC
CCCGCAAGCG GACTTGGCCT CAGGGAATCA TACCGCCGCT ATGATGCTGA AAAAAAGTTT
GATGTTGCAC ACCTCTGTGC CGCCGAGTCG CCCCTCTGCA TGAGCGGGAG TGTGCTGCAG
GGTGTTCTCA AGCCCGACGG CTGCCCTGCA TTTGCCCGTG AGTGCACCCC GGAACACCCC
CTCGGCGCCA CCATGGTCTC CTCCGAAGGG GCCTGTGCTG CCTATTACAA CTATCACCGA
AATTTCGCAC TATGA
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| Protein sequence | MKYIDEYRDP QLARKLLDEI RRKTTRHWTI MEICGGQTHS IIRNGIDQLL PDTIELVHGP
GCPVCVTPLE SIERALLIAA RKEVIFTSFG DMLRVPGSSK DLFMVRSEGG DVRILFSPLD
ALQIARDNPS KEVVFFAVGF ETTAPANAMA VWQAAREGIE NFSVLVSQVM VPPAMRAILS
SPENRVQGFL AAGHVCAVMG YEEYEPVARE FHVPIVPTGF EPVDLLAGIL KTVELLEEGR
AEVVNRYGRV VSREGNRVAQ GIISQVFEVT DRQWRGIGLI PASGLGLRES YRRYDAEKKF
DVAHLCAAES PLCMSGSVLQ GVLKPDGCPA FARECTPEHP LGATMVSSEG ACAAYYNYHR
NFAL
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